Bacillus spizizenii TU-B-10: GYO_1020
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Entry
GYO_1020 CDS
T01635
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bst
Bacillus spizizenii TU-B-10
Pathway
bst00040
Pentose and glucuronate interconversions
bst01100
Metabolic pathways
bst02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bst00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GYO_1020
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GYO_1020
Enzymes [BR:
bst01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
GYO_1020
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AEP85699
UniProt:
G4NRE9
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All DBs
Position
943142..944404
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AA seq
420 aa
AA seq
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MKKVMLATALLLGLTPAGANAADLGHQTLGSNDGWGAYSTGTTGGSKASSSNVYTVSNRN
QLVSALGKDTNTTPKIIYIKGTVDMNVDDNLKPLGLNDYKDPEYDLDKYLKAYDPSTWGK
KEPSGTLEEARARSQKNQKARVMVDIPANTTIVGSGTNAKIVGGNFQIKSDNVIIRNIEF
QDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYFGRKY
QHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNHYKNIVQR
APRVRFGQVHVYNNYYEGSTSSSDYAFSYAWGIGKSSKIYAQNNVIDVPGLPAAKTISVF
SGGTALYDSGTLLNGTQISASAANGLSSSVGWTPSLHGTIDASANVKSNVISQAGAGKLN
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtgatgttagccacggctctgctgttagggttgactccagctggcgcgaac
gcggcggatttaggccatcagacattaggatcaaatgatggctggggcgcgtactcgacc
ggtacaacaggcggatcaaaagcgtcgtcctcgaatgtgtataccgtcagcaacagaaac
cagcttgtctcggcattaggcaaggacaccaacacaacgccaaaaattatttatattaag
ggaacggttgacatgaacgtcgatgacaatctgaagccgcttggtttaaatgattataaa
gatccagagtacgatttggacaaatatttgaaagcctatgatcctagcacatggggcaaa
aaggagccgtcggggacactagaagaggcgagagcacgctctcagaaaaatcaaaaagca
cgagtcatggtggatattcctgcaaacacgacgatcgtcggttctgggacaaatgccaaa
atcgtgggcggaaacttccagatcaagagtgataatgtcatcatccgcaacatcgaattc
caggatgcttatgattattttccgcaatgggatccgactgacggcagctcaggaaactgg
aactcacaatacgacaacatcacgataaacggcggcacgcatatatggattgaccactgt
acatttaatgacggctcacgtccggacagcacatcgccaaagtatttcggcagaaaatat
cagcaccatgacggccaaaccgatgcctctaacggcgctaactatatcacgatgtcttac
aactattatcacgatcatgataaaagctccattttcggatcaagcgacagcaaaacatct
gatgatggcaaattaaaaattacgcttcaccataaccactacaaaaatatcgtccagcgc
gcaccgagagtccgcttcggacaggttcacgtatacaataactattatgaaggcagcaca
agctcctcagattatgccttcagctatgcgtggggaatcggaaaatcatctaaaatctac
gctcaaaacaatgtcattgacgtaccgggactgccagctgctaaaacgatcagcgtattc
agcgggggaacggctttatatgactcaggtacacttctaaatggcacgcagatcagcgca
tcggctgcaaacgggctgagttcttctgtcggctggacaccgtcactgcacggcacaatc
gatgcttccgcgaatgtaaaatcgaatgttatatctcaagcgggtgcgggtaaactaaat
taa
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