Bacillus spizizenii TU-B-10: GYO_1366
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Entry
GYO_1366 CDS
T01635
Symbol
addB
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bst
Bacillus spizizenii TU-B-10
Brite
KEGG Orthology (KO) [BR:
bst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bst03400
]
GYO_1366 (addB)
Enzymes [BR:
bst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GYO_1366 (addB)
DNA repair and recombination proteins [BR:
bst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GYO_1366 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
HTH_MCM7
Motif
Other DBs
NCBI-ProteinID:
AEP86021
UniProt:
G4NUU3
LinkDB
All DBs
Position
1250727..1254227
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AA seq
1166 aa
AA seq
DB search
MGAEFLVGRSGSGKTKLIIDSIQDELRRAPFGKPIIFLVPDQMTFLMEYELAKTPDMGGM
IRAQLFSFSRLAWRVLQHTGGMSRPFLTSTGVQMLLRKLIEEHKQEFKVYQKASDKSGFT
AQVERMLTEFKRYCLEPEDIRRMAESGTASEYRGERVLSEKLHDLSILYQQMEKSLADQY
LHSEDYLTLLAEHIPFAEDIKGAHIYVDGFYQFTPQEFRVLEQLMVHAEHITFSLTADKP
SYEREPHELELFRMTGKTYYRLHQKAKELNLDITYKELSGTERHTQTPELAHLEAQYEAR
PAIPYAEKQEAFTVMQAANRRAELEGIAREIHALVREKGYRYKDVAILARQPEDYKDMVK
EVFADYEIPYFIDGKASMLNHPLIEFIRSSIDVLKGNWPYEAVFRCVKTELLFPLNEPKT
KVREQVDQLENYCIAYGIKGDRWTRGDRFHYRRFVSLDDDFAQTDQEIEMENMLNDTRDW
IVPPLFQLQKRMKKAKTVQEKAEALYRYLEETDVPLKLDQERQRAEEDGRIIEAQQHQQA
WDAVIQLLEEFVEMMGDEEISLDLFQQMMEAGAESLTFSLIPPALDQVFVGNMDLSRMYG
TSCTFVLGANDGVLPARPDENGVLSDDDREWLKTVGIELSSGGRERLLDEHFLIYMAFSS
PSDRLYVSYPIADAEGKTLLPSIVIKRLEELFPQHKERLLTNEPEQVSDEEQLMYVVNKS
VAQSFTASQLRLWTREYDISDVWWSTYNVLMSEPDRLQSKKLFSSLFFRNEVKQLERSVS
RQLYGERIQGSVSRMETFNACPFSHFASHGLHLKERQFFKLEAPDIGQLFHSSLKLISDR
LREQKMDWRDLTKEQCELFSYDAVERLAPKLQKEILLSSNRHYYVKEKLQKIVTRVSGIL
SEHAKASGFVPIGLELGFGGKGPLPPLTFKLKNGCTMELVGRIDRVDKAESSKGLLLRIV
DYKSSDKGLDLAEVYYGLALQMLTYLDLSITHSADWLGMRATPAGVLYFHIHDPMIQSNL
PLGLDEIEQEIFKKFKMKGLLLGDQEAVRLMDTTLQEGRSNIINAGLKKDGSLRSDSAAV
GEKEFELLTKHVRRTFQEAGEQITDGRVSIEPYKMKNKTPCTYCAFKSVCQFDESLEENE
YRPLKAEKDKTILEWIKKEADGNEHS
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
ttgggagcagagtttttagtaggcagatccgggagtggaaaaacgaagctgatcatcgac
agcattcaggatgaactgcgccgggctccattcgggaaaccgatcatttttctagtcccg
gatcaaatgacgtttttaatggaatacgagcttgctaaaacgcctgatatgggcggaatg
atacgtgctcaattgttcagcttttcacgattggcctggcgcgtccttcagcatacggga
ggaatgagcaggccgtttcttacgagcacaggcgtacagatgctcctgcggaagctcatt
gaggagcataaacaggagtttaaagtctatcaaaaagcaagtgacaaaagcggatttacc
gcacaggttgaacggatgctgacagaatttaagcgttactgcctggaaccggaagatatc
cgccggatggcggaaagcggaacggcttccgagtatcgcggggaacgtgttttatctgaa
aagcttcatgatttatcaattctgtatcagcagatggaaaaaagccttgcagatcaatat
cttcactctgaggattatttgacattgctggcagagcatattccgtttgcggaagatata
aaaggcgcgcatatttatgtggacggcttttatcaatttacaccgcaggaattcagggtg
ttggagcagcttatggttcatgcggagcacatcacgttttcgctcacagcggacaagccg
tcatatgagcgggagccgcatgaactggaattgttcagaatgacgggaaaaacgtattat
cgcctgcatcagaaggcgaaggaactgaatctggacattacctataaagagctaagcggg
actgagcggcatacgcagacgccggaactggcacatctagaggcgcagtatgaagcgcga
ccggccatcccgtacgcagaaaaacaagaggcttttactgtgatgcaggccgcaaacaga
cgagctgaactggaaggcattgcccgggaaattcacgctcttgtcagagagaagggctat
cgctataaggatgtagcgattcttgcgcgccagccggaagactacaaggatatggtgaag
gaagttttcgcagattacgagattccttatttcattgacggaaaagcttctatgctgaac
catccgttaatagaatttatccggtcgagcattgatgttctgaaagggaattggccttat
gaagcggtgtttcgctgcgtgaaaaccgaactgctattcccgcttaacgagccgaaaact
aaggtgagagaacaggtcgatcagcttgaaaattactgtatcgcctacgggatcaaaggc
gatcgctggacaaggggcgaccgtttccattacagacgttttgtgtcattggatgatgat
tttgcgcaaaccgatcaggaaatcgaaatggaaaacatgctgaatgacacacgcgactgg
attgttccgccgctttttcagcttcaaaaacgaatgaaaaaagcaaagacggttcaggag
aaggcggaggcgctctaccgctatctagaagagacggatgtgccgctgaagctggatcag
gaaagacagcgtgctgaggaagacggcagaatcattgaagcgcagcagcatcagcaggcg
tgggatgcagtcattcagctgcttgaggagtttgttgaaatgatgggagatgaagagatt
tctcttgatttgtttcagcaaatgatggaggccggcgcggagtcgcttacattttctcta
attccgcctgcgcttgaccaggtgtttgtcggcaatatggatttatccagaatgtacggc
acctcttgcacctttgtgctgggggcaaacgacggcgttctgcctgcacgccccgatgaa
aatggggtgctgtcagacgatgaccgggaatggctgaaaacggttgggattgaactttcc
tcaggcgggcgggagcgtctgcttgatgagcatttcctcatctatatggcgttttccagt
ccgtctgaccggctttacgtatcgtatccgattgccgatgcggaaggaaaaacgcttttg
ccatcgattgtcattaaacggctggaagaactgtttccgcagcataaggagcgtctgttg
acaaatgaacctgaacaggtcagcgatgaggaacagcttatgtatgtcgtcaataaaagc
gtggcacagtcctttaccgcgagccagctcagattatggactcgggaatacgacatcagc
gacgtctggtggagcacgtacaatgtgctgatgagtgagccggacaggctgcaatcgaaa
aagctgttctcaagcctgtttttccggaatgaagtgaagcagcttgaacgcagcgtgtcg
agacagctttatggtgaacgcattcagggcagtgtatcgagaatggaaacctttaacgcg
tgcccgttctcccattttgcatcacacgggctgcatctaaaggaacggcaatttttcaag
ctcgaagcaccggatatcggccagctgtttcattccagcttaaagctgatttcagaccgg
ctgcgcgagcaaaaaatggattggcgcgatttaacgaaagagcagtgcgaactgttttcc
tatgatgcggtagagcggctggcgccgaaactgcaaaaggaaattttgctcagctcaaac
cggcattattatgtaaaggaaaaactgcaaaaaattgtgacacgcgtgtctggcatttta
agcgagcatgcgaaagcgagcggatttgtgccgattgggcttgaactgggctttggagga
aaagggccgcttccgccgctgacctttaagctgaaaaacggctgcacgatggaactcgtc
gggcgaattgaccgcgtagataaagcggaaagctcaaaaggcctgctcctaaggattgtc
gattataaatcaagcgacaaaggccttgacttagcggaagtatattacggactggcgctg
caaatgctgacgtatcttgatttatcaattactcattcagctgactggctcggaatgagg
gcgacgcctgccggagtgctgtatttccatattcatgacccgatgattcaatctaatctc
ccgcttgggcttgacgagattgaacaggagatctttaagaaatttaaaatgaagggcttg
ctcctcggcgatcaggaagcggttcgcctcatggatacgacccttcaagagggacggtcg
aatatcatcaacgcgggcttgaagaaagacggctctctcagatcggattcagcggcagtc
ggcgagaaggaatttgagctgttgacgaagcatgtgcgccgcaccttccaagaagcaggc
gaacaaatcactgacggacgcgtatcgattgagccgtataaaatgaagaacaagacgccg
tgcacatactgtgcgttcaaatcagtatgccaatttgatgagtcattagaagaaaacgag
tatcgcccgttaaaggctgaaaaggataagacgatacttgagtggataaaaaaggaggcg
gatggcaatgaacattcctaa
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integrated database retrieval system
