Bacillus subtilis subsp. spizizenii TU-B-10: GYO_1863
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Entry
GYO_1863 CDS
T01635
Symbol
spoVD
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
bst
Bacillus subtilis subsp. spizizenii TU-B-10
Pathway
bst00550
Peptidoglycan biosynthesis
bst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bst00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GYO_1863 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bst01011
]
GYO_1863 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
bst01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
GYO_1863 (spoVD)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
AEP86502
UniProt:
G4NS41
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All DBs
Position
1687795..1689735
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AA seq
646 aa
AA seq
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MRVSNVTVRKRLLFVLLFGVIVFLIIDTRLGYVQFVMGEKLTSLAKDSWSRNLPFEPERG
EILDRNGVKLATNKSAPTVFVVPRQVQNPMKTSKQLAAVLNMSEEKVYKHVTKKASIEKI
TPEGRKISNEKAKEIKALDLKGVYVAEDSIRHYPFGSFLSHVLGFAGIDNQGLLGLEAYY
DDDLKGEKGSVKFYTDAKGKKMPDEADDYTPPKDGLDMKLTVDSKVQTIMERELDNAEAK
YHPDGMIAVAMNPKNGEILGMASRPDFDPADYQSVDPSVYNRNLPVWSTYEPGSTFKIIT
LAAALEEQKVNLKRDQFYDKGHAEVDGARLRCWKRGGHGLQTYLEVVQNSCNPGFVELGE
RLGKEKLFKYIKDFGFGQKTGIDLQGEGTGILFPLDRVGPVEQATTAFGQGVSVTPIQQV
AAVSAAVNGGTLYTPYIAKEWIDPVTKKTVKKQSPIAKKQVISEGTSKQIRYALESVVAE
GTGRNAFVEGYRVGGKTGTAQKVKDGKYLENNHIVSFIGFAPADDPSLVVYVAVDNPKGT
IQFGGTVAAPIVGNIMRDSLPELGVKPRKNQIEKKYQWNDTKTVEVPNVVGMSVSDLESL
LVNLNVDASGKGSKIVKQSPAAGTKVKEGSKIRVYLTEEDEKEAAD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtctcgaatgtaacggttagaaaacgtttattatttgttttgctttttggcgtg
atcgtgtttctgatcattgatactaggctggggtatgttcagtttgtgatgggcgagaaa
ctgacttcgctggcgaaagattcctggagcaggaacttgccgtttgagccggagagaggc
gagattctggatcggaacggtgtgaaactcgcaacaaacaaaagtgcgccgaccgtattc
gtcgtgccgcgccaagttcagaatccaatgaaaacgagcaagcagcttgcggcggtttta
aacatgtcagaagaaaaagtatataagcatgtgacaaaaaaagcgtcaatcgaaaagata
actcctgaaggaagaaagatttcaaatgaaaaggcgaaagaaatcaaagcgcttgattta
aagggagtgtatgtagcggaggatagtatccgccattacccgttcggcagctttttatct
catgtgcttggatttgccgggattgacaaccaagggctccttggacttgaagcctattac
gacgatgatctaaaaggggaaaaaggttctgttaagttttatacagatgccaaggggaag
aaaatgcctgatgaagcggatgactacacgccgcctaaggacgggcttgatatgaagctg
acagttgattcaaaggttcaaacgataatggaaagagagcttgataacgctgaggccaaa
tatcaccctgacggtatgattgctgtggccatgaatccgaaaaacggagaaatattggga
atggctagcaggcctgactttgacccggctgattatcaatcggtcgatccgtccgtctac
aatcggaatctgccggtatggagcacgtatgagccgggatctacctttaagattattaca
cttgcagcagcacttgaggagcaaaaagtaaatttaaaacgtgatcaattttatgataaa
gggcatgcggaagtggacggagctagactgcggtgctggaaaagaggcgggcatgggctg
cagacgtatctagaagttgtacagaactcctgcaacccggggtttgttgaattaggcgag
cgcttaggaaaggagaagcttttcaaatatatcaaagactttggtttcggccaaaaaacg
ggaattgatctgcagggcgagggaacaggaatcttattcccgcttgacagagtaggtccg
gtggagcaagcgacgacggctttcggacagggggtatctgtcacgccgattcagcaggtt
gcagccgtatccgccgctgtaaacggaggaacgctctacacaccttatattgcaaaggaa
tggatcgatcctgtaacgaaaaaaaccgttaaaaaacaatcaccaatcgcaaagaaacaa
gttatttctgaggggacatcaaaacaaatccgctatgcattagagagcgtcgtcgcagaa
ggcacaggccgcaatgcatttgttgaagggtatcgtgtcggcggaaaaacgggaactgca
caaaaggttaaagatggaaaataccttgaaaacaaccatattgtatcatttatcggtttc
gcgccggctgacgatccgagtcttgtcgtctatgtcgcggtggataaccctaaaggcacg
attcagtttggcggaacggttgcagcgccaattgtcgggaatattatgagagacagcctg
ccggagcttggtgtgaagcctcggaaaaatcaaatcgagaaaaaataccaatggaacgac
acaaaaacagtagaagttccgaatgttgtagggatgtctgtctcagatcttgagtcactt
ttggtgaatctcaatgtagatgcttccgggaaagggagcaaaatcgttaaacaatcgcca
gctgccggaacgaaagtaaaagagggctcaaagatacgcgtttatttgactgaagaagat
gaaaaggaggcagccgattaa
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