Bacillus spizizenii TU-B-10: GYO_1921
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Entry
GYO_1921 CDS
T01635
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bst
Bacillus spizizenii TU-B-10
Pathway
bst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GYO_1921 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bst03400
]
GYO_1921 (priA)
Enzymes [BR:
bst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GYO_1921 (priA)
DNA repair and recombination proteins [BR:
bst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GYO_1921 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
ResIII
DEAD
Zn_ribbon_PriA
Helicase_C
PIF1
Zn_ribbon_6
ATPase_2
Cas3-like_C_2
AAA_19
nSTAND_NTPase5
AAA_30
HypA
T2SSE
SLFN-g3_helicase
TrwB_AAD_bind
nSTAND3
IBR_1
Motif
Other DBs
NCBI-ProteinID:
AEP86559
UniProt:
G4NS98
LinkDB
All DBs
Position
1747653..1750070
Genome browser
AA seq
805 aa
AA seq
DB search
MNFAEVIVDVSTKNIDRPFDYKIPDHLKGMIKTGMRVIVPFGPRKIQGFVTAVKEASDLS
GKSVKEVEDLLDLTPVLTEELMNLSSWLSDKTLSFKITALQAMLPAALKAKYEKELKIAH
GADLPPQVERLFSETKTLLYSDIPDHDTLKLIQKHVQKGSIDVTYKVAQKTNKKMVRHIQ
ANASKEELSKQAEGLSRQAAKQQAILHFFTAEPEGVKIPAADLCKKTDASSATIKTLIQK
GLLKESYEEVYRDPYQDKMFKKTEPLPLTDEQSAAFQPIRQTLDNDEHKVFLLHGVTGSG
KTEIYLQSIEKVLAKGKEAIVLVPEISLTPQMVNRFKGRFGSQVAVMHSGLSTGEKYDEW
RKIHRKEVRLVVGARSAIFAPFENLGMIIIDEEHESSYKQEEMPRYHAKEVAIKRAEHHS
CPVVLGSATPTLESYARAQKGVYELLSLKHRVNHQVMPEVSLVDMREELRSGNRSMFSVE
LMEKLEETIAKGEQAVLFLNKRGYSSFVMCRDCGYVPQCPHCDISMTYHRYGQRLKCHYC
GHEEPVPHTCPECASEHIRFFGTGTQRVEEELTKVLPNARVIRMDVDTTSRKGAHEKLLS
AFGEGKADILLGTQMIAKGLDFPNVTLVGVLSADTTLHIPDFRSAEKTFQLLTQVSGRAG
RHEKPGHVIIQTYTPSHYSIQLTKTHDYETFYQHEMAHRREQSYPPYYYLALVTVSHEEV
TKAAVTAEKIAHFLKANCGADTKILGPSASPIARIKDRYRYQCVIKYKQETQLSALLKKI
LEHYKREIEQKHVMISIDMNPYMMM
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgccgaagtcatcgttgatgtcagcaccaaaaatatagacaggccttttgat
tacaaaatcccagaccatctcaaaggcatgatcaaaacgggcatgcgagtcattgtcccg
tttggtccccgtaaaattcaagggtttgtgacagctgtgaaagaagcatctgatctctcg
gggaaatctgtcaaggaggtagaggatttattagatcttacacctgttttgacagaggag
cttatgaatttgtcatcatggctgtccgacaaaacgctgtcttttaaaataacggcgctt
caagcgatgctgcctgccgcattaaaggcgaaatatgaaaaagaattaaagatcgcacac
ggtgccgatctaccaccgcaagtggaacggctgttttctgaaacaaagactcttctgtat
tcggatatacccgatcacgatacgctgaaactgattcaaaagcatgttcaaaaaggcagc
attgatgtgacgtataaagttgcgcaaaaaaccaataaaaaaatggtcaggcatattcag
gcaaatgccagtaaagaagagcttagcaagcaggctgagggattatctcgccaagcagcc
aagcagcaggcgattcttcactttttcaccgctgagccggaaggggtgaaaatccctgca
gcggatttgtgcaaaaaaacggacgcgagctctgcgaccatcaaaacccttatccaaaag
gggcttttgaaggaaagctatgaagaggtttacagagatccctatcaggacaaaatgttc
aaaaaaacagagccgctcccgctgacagacgaacagagcgctgcctttcagccaatacgc
cagacgttggacaacgatgaacataaagtgttccttcttcacggcgtaacaggcagcgga
aaaacagaaatttatctgcaatcaattgagaaagtactggcgaaaggaaaagaagccatc
gtcctcgtgccggaaatctcgctgacgccacagatggtcaatcgcttcaagggccgtttc
ggctctcaggtggcagtcatgcacagcggattatccacaggggaaaaatatgatgagtgg
cgtaaaatccaccggaaggaagtacggcttgtcgtcggcgccagatcggctatttttgca
ccgtttgaaaatctcggaatgattatcatcgatgaagagcatgagtcctcttataaacaa
gaagaaatgccgcgctatcatgcgaaagaggtggcgatcaagcgggctgagcatcacagc
tgtcctgttgtgctgggcagcgctacgccgacattagagtcatatgcacgggcgcaaaag
ggtgtgtacgagcttctttcgctgaagcaccgcgttaatcatcaggtgatgcctgaggtt
tcgcttgttgatatgagagaggagctcagaagcggcaatcgctcaatgttttcagttgaa
ttgatggaaaagcttgaagaaacgattgccaagggcgagcaggctgtgctgtttttaaat
aaaaggggctattcttcctttgtgatgtgcagggattgcggatatgtcccgcaatgcccg
cactgcgacatttccatgacgtatcatcgttatggccaaaggctgaaatgccattattgc
ggacatgaagagcctgtcccgcatacttgtccagaatgtgcaagcgagcatatccgcttt
ttcgggacggggacacagcgtgtggaggaagagctgacaaaagtgctgccaaatgcgaga
gtgattcgaatggatgttgatacgacttcaaggaaaggcgcccatgaaaaattattgtca
gctttcggagaaggaaaagcggatattcttctcggaacgcaaatgattgcgaaagggctt
gattttccgaatgtcacacttgtcggagtgttaagtgctgatacaacactccatattcct
gatttcagatcggccgaaaaaacatttcagctgttaacgcaagtcagcggccgggcaggc
aggcatgaaaaacccggccatgtcatcattcaaacgtacacaccgtcccattacagcatc
cagctgacgaagacgcacgattatgaaacgttctatcagcatgaaatggctcacaggaga
gagcaatcctatccgccttattactatttggctcttgtgactgtttctcatgaagaagta
acgaaagcagctgttacggctgaaaaaatcgctcactttttgaaagcaaactgcggagct
gacacgaaaattcttgggccaagcgcgtcgcctatagccaggatcaaagatagatatcgc
tatcaatgcgtgataaaatacaaacaggaaacccagttatccgctttattgaagaagata
ctggaacattataaacgagaaattgaacaaaagcatgtaatgatttcaattgatatgaat
ccttatatgatgatgtaa
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