Bacillus spizizenii TU-B-10: GYO_1966
Help
Entry
GYO_1966 CDS
T01635
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bst
Bacillus spizizenii TU-B-10
Brite
KEGG Orthology (KO) [BR:
bst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bst03032
]
GYO_1966 (topA)
03400 DNA repair and recombination proteins [BR:
bst03400
]
GYO_1966 (topA)
Enzymes [BR:
bst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GYO_1966 (topA)
DNA replication proteins [BR:
bst03032
]
Prokaryotic type
DNA Topoisomerases
GYO_1966 (topA)
DNA repair and recombination proteins [BR:
bst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GYO_1966 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Zn_ribbon_3
Zn_ribbon_ACC
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
AEP86601
UniProt:
G4NSM1
LinkDB
All DBs
Position
1787245..1789320
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDIEQNFEPKYITIRGK
GPVLKELKTAAKKAKKVYLAADPDREGEAIAWHLAHSLDLDLNSDCRVVFNEITKDAIKE
SFKHPRMINMDLVDAQQARRILDRLVGYKISPILWKKVKKGLSAGRVQSVALRLIIDREK
EINDFKPEEYWTIDGTFLKGQETFEASFFGKNGKKLPLKSEADVKDILSQLKGNKYTVEK
VTKKERKRNPALPFTTSTLQQEAARKLNFRAKKTMMIAQQLYEGIDLGREGTVGLITYMR
TDSTRISNTAVDEAAAFIDQAYGKEFLGGKRKPAKKNENAQDAHEAIRPTSVLRKPSELK
AVLGRDQMRLYKLIWERFVASQMAPAVLDTMSVDLTNNGLTFRANGSKVKFSGFMKVYVE
GKDDQMEEKDRMLPDLQEGDTVLSKDIEPEQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQRRGYVGLDNKRFVPTELGQIVLELIMEFFPEIINVEFTAKMEKDLDNVEEGN
IEWVQIIDNFYTDFEKRVKKAESEMKEVEIEPEYAGEDCELCSSPMVYKMGRYGKFLACS
NFPDCRNTKPIVKQIGVKCPSCGEGNIVERKSKKKRVFYGCDRYPDCEFVSWDKPIERKC
PKCGKMLVEKKLKKGIQVQCVECDYKEEPQK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattatctagtcatcgtggaatcgcccgctaaggcgaaaacgattgaacgttac
ttaggtaaaaaatataaagtaaaagcatcaatgggacatgtccgggatcttccaaaaagt
caaatgggagttgacatagaacagaattttgaaccgaaatatattaccattcgaggtaaa
gggccggtattaaaagagctgaaaacggctgcgaaaaaagccaaaaaagtgtatctcgca
gccgaccccgacagagaaggggaagcgattgcatggcacttggcacacagccttgattta
gatcttaattcagactgccgtgtggtgtttaatgaaattacaaaagacgccattaaggaa
tcgtttaagcatcctcgcatgatcaatatggatttagtggatgcacagcaggcgagacgt
attttagaccggcttgtcggatataaaatcagtcctatcctatggaaaaaagtcaagaaa
gggcttagcgcaggccgcgttcaatccgttgccctccgtttaattattgatcgcgaaaaa
gaaattaacgactttaagccggaggaatattggacaattgacggtacgtttttgaaagga
caggaaacgttcgaagcgagctttttcggaaaaaacggcaaaaaacttcctttaaaaagt
gaagccgatgtaaaagacattctttctcagctcaaaggcaataaatatacagttgaaaaa
gtaacgaaaaaggaacgcaaacgtaatccagctttgccttttaccacttccaccctgcaa
caggaagcggctcgcaagctcaatttcagagcgaagaaaacgatgatgattgcacagcaa
ttatatgaaggaattgatcttggaagagaaggaacagtcggtctgatcacgtatatgaga
acggattcaacccgtatttcaaatacggcggtggatgaagctgctgcatttattgatcag
gcatacggcaaagagttcttaggcggcaaacgaaagcctgcgaaaaagaatgaaaatgct
caggacgctcacgaagcaattcgcccgacatcagttctcagaaaaccaagtgaattaaaa
gcagtacttggcagagatcaaatgagattgtataaattaatttgggagcgctttgttgcc
agccaaatggcccctgctgttctcgatacaatgagtgtcgacctgacaaacaatggtttg
acatttcgtgcaaatggaagtaaagtcaagttttccgggtttatgaaggtgtatgttgaa
ggaaaagacgatcaaatggaagaaaaagaccggatgctgcctgacctacaagaaggcgac
acggtattatcaaaagatatagaaccggagcagcattttacccagccgcctccgcgttat
actgaggcacggctcgtgaaaactcttgaagaactcggtatcggccgtccttccacatat
gctccgacgcttgataccattcagcgacgcggctacgtaggactggataataaacggttt
gttcccacagaattagggcagatcgtgcttgagctgatcatggaatttttccccgaaatc
attaacgttgagtttacggcaaaaatggaaaaagacctagataatgttgaggaaggcaat
atagaatgggtacagattattgataacttctataccgattttgaaaagcgcgtgaaaaaa
gccgaatcagaaatgaaggaagttgaaattgaaccagaatatgccggagaagattgtgaa
ttgtgcagttctccaatggtatataaaatgggccgatacggtaaattcttagcttgctcc
aacttcccggactgccggaacacaaaaccgattgtgaaacaaatcggtgtgaagtgcccg
agctgcggtgaaggaaatattgttgaacgaaaatcgaaaaagaaacgggttttttacggc
tgtgaccgttatccggactgtgaattcgtttcctgggacaaaccaattgaacgaaaatgc
ccgaaatgcggaaaaatgctcgtcgagaaaaaactcaaaaaaggcatacaagtccaatgc
gtggaatgcgattataaggaagaaccacagaagtag
DBGET
integrated database retrieval system
