Bacillus spizizenii TU-B-10: GYO_2778
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Entry
GYO_2778 CDS
T01635
Name
(GenBank) YqfR
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bst
Bacillus spizizenii TU-B-10
Brite
KEGG Orthology (KO) [BR:
bst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bst03019
]
GYO_2778
03009 Ribosome biogenesis [BR:
bst03009
]
GYO_2778
Enzymes [BR:
bst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GYO_2778
Messenger RNA biogenesis [BR:
bst03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GYO_2778
Ribosome biogenesis [BR:
bst03009
]
Prokaryotic type
rRNA helicases
GYO_2778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
PhoH
AAA_22
DUF3391
Motif
Other DBs
NCBI-ProteinID:
AEP87389
UniProt:
G4NPS2
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All DBs
Position
complement(2575226..2576542)
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AA seq
438 aa
AA seq
DB search
MKETKFELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLL
PLLNKIDPAKDVVQVVITAPTRELANQIHQEALKITQGEEGSQIRSKCFIGGTDKQKSID
KLKTQPHLVVGTPGRIADLIKEQALSVHKAESLVIDEADLMLDMGFIADVDYIGSRMPED
LQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKQVTAAKIEHILIPSKHRDKDKLLFDIM
SHLNPYLGIVFANTKNTADHIAQYLTGKGMKIGLLHGGLTPRERKKVMKQINDLEFTYVI
ATDLAARGIDIKGVSHVINYELPDDLDFYIHRVGRTARAGSSGQAMTIFELSDEDSLARL
EKMGIEFDYLELEKGEWKKGDDRQRRKKRKKTPNEADEIAHRLVKKPKKVKPGYKKKMSY
EMEKIKKKQRRNQSKKRK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaacgaaatttgaactttatgaattgaaaccatttattatagatgcagtacac
cgccttggtttttacgaaccgactgatattcagaaaaggctgattcctgcagtgttaaaa
aaagaaagcgtcatcggccagtcacagacgggaactggaaagacgcatgcttatttactg
cctttattaaacaaaatcgatcctgccaaggatgtcgttcaggttgtcattacggctccg
actagagagcttgccaaccagattcatcaggaagcgcttaaaatcacacagggtgaggaa
ggcagccagattcgctcgaaatgttttatcggaggcacagataaacaaaaatcgattgat
aaactgaagacacagccgcatcttgttgtcggtacgcccggacggattgccgatttaatc
aaagaacaggcgttaagtgttcataaagcggaatctctcgtcattgatgaagcggattta
atgctggacatgggatttattgcagatgtagattacattggttctcgcatgcctgaggat
ctgcagatgcttgtgttctcagcgacgattccggaaaagctgaaaccatttttgaaaaaa
tatatggaaaatccgaaatacgcccacgtggagccaaaacaggtgactgctgcgaaaatc
gagcatattctcattccctcgaaacatcgtgacaaggacaagctcctttttgacatcatg
tctcatctgaatccatacttgggcattgtgtttgccaatacgaaaaacactgctgaccat
atcgctcaatatttaactggaaaaggtatgaaaatcgggctgctacacggcggattaacg
cctcgtgaacggaaaaaagtcatgaagcagatcaatgatttagaattcacttatgtcatt
gcaacggaccttgccgcaagaggcattgatattaaaggtgtcagtcatgttatcaactat
gagctgccggatgatctcgatttctatattcaccgtgtgggcagaacggctcgcgctggc
tcatcaggacaagcgatgaccattttcgagctttctgatgaggattcattagccagactt
gagaaaatgggcatcgaatttgattacttagagcttgaaaagggcgagtggaaaaaaggc
gatgaccgccagcgccgcaaaaaacgcaaaaaaacgccgaacgaagcggatgaaattgcg
catcgtcttgtgaaaaagccgaaaaaggtaaagcctggatataaaaagaaaatgagctac
gagatggagaaaatcaagaaaaaacagagaagaaaccaatctaaaaaaagaaagtag
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