Bacillus spizizenii TU-B-10: GYO_3105
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Entry
GYO_3105 CDS
T01635
Name
(GenBank) MutS2 family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
bst
Bacillus spizizenii TU-B-10
Pathway
bst03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GYO_3105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bst03400
]
GYO_3105
DNA repair and recombination proteins [BR:
bst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
GYO_3105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
DUF5995
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEP87708
UniProt:
G4NYT0
LinkDB
All DBs
Position
complement(2866910..2869267)
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AA seq
785 aa
AA seq
DB search
MQQKVLSALEFHKVKEQVIEHAASSLGKEMLLELKPSASIDEIKKQLDEVDEASAIIRLR
GQAPFGGLTDIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFISQMAEDGVDIPLIQ
QHTEQLITLSDLERDINSCIDDHGEVLDHASETLRGIRTQLRTLESRIRDRLESMLRSSS
ASKMLSDTIVTIRNDRFVIPVKQEYRSSYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQA
KVKEKQEIERILRVLTEQTAEHTEELFQDLHVLQTLDFIFAKARYAKAVKATKPIMNDNG
FVRLKKARHPLLPPDQVVANDIELGGDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLH
IPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAG
TDPQEGAALAMSILDDVHRTHARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYK
LLIGVPGRSNAFEISKRLGLPDHIIGQAKSEMTAEHNEVDTMIASLEQSKKRAEEELSET
ESIRKEAEKLHKELQQQIIELNSKKDKMLEEAEQQAADKVKAAMKEAEDIIHELRSIKEE
HKSFKDHELINAKKRLEGAVPTFEKSKKPEKTKTQKRDFKPGDEVKVLTFGQKGTLLEKT
GGNEWNVQIGILKMKVKEKDLEFIKSAPEPKKEKIITAVKGKDYHVSLELDLRGERYENA
LSRVEKYLDDAVLAGYPRVSIIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVT
VVELK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcaaaaagtattatcagctcttgaatttcataaagtgaaagaacaggttattgag
catgccgcttcatcgctcggaaaagaaatgcttctcgagcttaagccttctgcttctata
gacgaaatcaaaaaacagctggatgaagtagacgaagcttctgccattatcaggctgaga
ggccaggcgccatttggcggccttactgatatcagaggagcgttaagacgggcggaaatc
ggcagcgttctcagtccctcagaattcactgaaatctcaggactgctttatgcagttaaa
caaatgaaacattttatcagccaaatggctgaagatggcgtcgacattccgctgatccaa
cagcatactgaacagcttatcacgctgtccgatttagagcgggacattaattcctgcatt
gatgatcacggagaagtgcttgatcacgcgtcggaaacattgagaggaatccgcacacag
ctcagaacacttgaatcgagaatcagagaccggttagagtcaatgctgcgctcctcttcc
gcttcaaaaatgctttctgatacgatcgttacgattcggaatgaccgctttgtgattcca
gtcaaacaagagtacagatcaagctacggaggaattgtgcacgacacttcttcctcaggc
gcgacactgttcattgaaccacaggcaattgtagatatgaacaactcgcttcagcaggcg
aaagtgaaagaaaaacaagaaattgaacggattttgcgcgtgctgacagagcaaacggcg
gagcacacagaagagctctttcaagatttgcacgtactgcagacgcttgactttattttt
gcaaaagcaagatacgcaaaagcggttaaagcgacaaaaccgatcatgaacgacaacggc
tttgtccgtttgaaaaaagcccgccatccattgcttccgcctgatcaggtggttgccaat
gacatcgagcttggcggcgacttttcaaccattgtcattacagggccaaacaccgggggg
aaaacagtcacccttaaaacgttaggcctgttaaccttgatggcgcaatccggtcttcat
attccggcagatgaaggatcagaagccgcggtatttgaacatgtattcgctgatatcggc
gatgaacagtcgattgagcaaagcttaagtacgttctcatcccatatggtgaacattgtc
ggcattttagaacaggtcaatgaaaacagcctagtgctcttcgatgagctgggcgcaggg
acagacccgcaagaaggggcggccctcgctatgagcatcttggatgacgtgcaccgcact
catgcaagagtgttggccacgacgcattatccggaattgaaggcgtacggctataacaga
gaaggcgtcatgaatgccagtgtggaatttgacatcgaaacgctgtcgccgacctataaa
cttttaattggtgtgccgggacgaagcaacgccttcgaaatttcaaaacgccttgggctc
ccggaccatatcatcgggcaggcgaagtcagaaatgacggccgagcataacgaagtcgat
acgatgattgcgtcgctggaacaaagcaaaaaacgtgcggaagaagagctttctgagaca
gaatcaattagaaaagaagcagaaaaactgcataaagagctgcagcagcaaatcatcgag
ctcaacagcaaaaaagacaaaatgctcgaggaggctgaacagcaagcggctgataaagta
aaagcggcaatgaaagaagccgaagacattattcatgaattgcgctcaataaaagaagaa
cacaaatccttcaaggatcacgaactgatcaacgcgaagaaacggttagaaggcgcagtt
cctacttttgaaaagtccaaaaaaccggaaaaaacgaaaacgcaaaaacgtgacttcaag
ccaggtgatgaggtgaaagtcctcaccttcgggcaaaaaggaacactgcttgaaaaaacc
ggcggcaatgagtggaatgttcaaatcggcatattaaaaatgaaagttaaagaaaaagac
ctggagtttatcaaatctgctccggaaccaaaaaaagaaaaaatcattacggcggtcaag
ggaaaggattatcacgtatcgcttgaacttgatcttcgcggcgaacgctatgaaaatgcc
ctaagccgtgttgaaaaatacttggacgatgcagtgttagccggatatccaagagtgtca
atcatccacggaaaaggaaccggcgctttaagaaaaggcgtgcaggatcttctgaaaaac
caccgcagcgtcaaaagctcccgtttcggtgaagcaggtgagggaggatcaggcgttacg
gttgttgaactaaaataa
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