Brevundimonas staleyi: ACETK8_02055
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Entry
ACETK8_02055 CDS
T10734
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bsta Brevundimonas staleyi
Pathway
bsta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACETK8_02055 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsta03021
]
ACETK8_02055 (rho)
03019 Messenger RNA biogenesis [BR:
bsta03019
]
ACETK8_02055 (rho)
Transcription machinery [BR:
bsta03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACETK8_02055 (rho)
Messenger RNA biogenesis [BR:
bsta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACETK8_02055 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
AAA_22
OB_RNB
AAA
S1CSD-TOTE-2
DUF6360
Spore_III_AA
AAA_25
NACHT
Motif
Other DBs
NCBI-ProteinID:
XGJ08686
LinkDB
All DBs
Position
complement(392284..393723)
Genome browser
AA seq
479 aa
AA seq
DB search
MTDVRDTDNTAPESETLGAEALEGLTPTDDSQADGANDADVAADIGDDAEEDGEPVVPSG
RITLQELNDKTPVELVAFAEQLEIENASNLRKQDLLFAILKTLADEEVEIIASGTLEMLP
DGFGFLRSPDANYLPGPDDIYVSPSQIRRFGLRSGDTVHGAVRGPREGERYFALLKVDTI
NFEDPETVRTKVNFDNLTPLYPNERLTMEIQDPTLRDRSGRVIDIVAPLGKGQRCLIVAP
PRVGKTVMLQNIAKSIEANHPEVSLIVLLIDERPEEVTDMQRTVKGEVVASTFDEPATRH
VAVAEMVIEKAKRLVEHKKDVVILLDSVTRLGRAYNATVPSSGKVLTGGVDANALQRPKR
FFGAARNVEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPAID
VLKSGTRKEELITPKDQLTKTYVLRRILNPMGPQDAIEFLLDKLRQSKNNGDFFQSMNT
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtccgcgacaccgacaacaccgccccggaatccgagacccttggggccgaa
gcgctcgagggcctgacccccactgatgactctcaggccgacggcgccaacgacgccgac
gtggccgccgacatcggcgacgatgccgaagaggacggcgaacccgtcgtcccgtccggc
cgcatcacgcttcaggagctgaacgacaagaccccggtcgagctggtcgccttcgccgaa
cagctggagatcgagaacgcctcgaacctgcgcaaacaggatctgctgttcgccatcctg
aagaccctggccgatgaagaggtcgagatcatcgcctccggcaccctggagatgctgccg
gacggcttcggcttcctgcgctcgccggacgccaactaccttccgggtccggacgatatc
tatgtgtcgccgtcccagatccgccgcttcggcctgcgctcgggcgacaccgtccacggc
gccgtgcgcggcccccgcgagggcgagcgctacttcgccctgctcaaggtcgacacgatc
aatttcgaggacccggagacggtccgcaccaaggtcaatttcgacaacctgaccccgctc
tatcccaacgagcggctgaccatggaaatccaggatccgaccctgcgggaccgttcgggc
cgggtcatcgacatcgtcgccccgctcggcaagggccagcgctgcctgatcgtcgccccg
ccgcgcgtcggcaagacggtcatgctgcagaacatcgccaagtcgatcgaggccaaccac
cccgaggtctcgctgatcgtcctcctgatcgacgaacgcccggaagaagtcaccgacatg
cagcgcaccgtgaagggcgaggtcgtggcctccaccttcgacgagccggccacccgccac
gtcgccgtcgccgagatggtgatcgaaaaggccaagcgcctggtcgagcacaagaaggac
gtcgtcatcctgctggactcggtcacccgtctgggccgggcctacaacgccaccgtcccg
tcgtcgggcaaggtcctgaccggcggcgtcgacgccaacgccctgcagcgtccgaaacgc
ttcttcggcgccgcgcggaacgtggaggagggcggttcgctgaccatcatcgccaccgcc
ctgatcgacaccggctcgcgcatggacgaggtgatcttcgaagagttcaagggcaccggt
aactcggaaatcgtcctggaccgcaaggtcgccgacaagcgcatcttcccggccatcgac
gtgctgaagtccggcacccgcaaggaagagctgatcacgccgaaggaccagctgaccaag
acctatgtgctgcgtcgcatcctgaacccgatgggcccgcaggacgccatcgagttcctg
ctcgacaagctgcgccagtccaagaacaacggcgacttcttccagtcgatgaacacatga
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