Brevundimonas staleyi: ACETK8_11125
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Entry
ACETK8_11125 CDS
T10734
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bsta Brevundimonas staleyi
Pathway
bsta03410
Base excision repair
bsta03430
Mismatch repair
bsta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACETK8_11125 (recJ)
03430 Mismatch repair
ACETK8_11125 (recJ)
03440 Homologous recombination
ACETK8_11125 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsta03400
]
ACETK8_11125 (recJ)
DNA repair and recombination proteins [BR:
bsta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ACETK8_11125 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACETK8_11125 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACETK8_11125 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
XGJ06636
LinkDB
All DBs
Position
2191918..2193735
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AA seq
605 aa
AA seq
DB search
MADGAPAAGLAPGFLDVSRSLSGRAWRQRPAEASTIRAHMQTLGLSEPLARALASRGVGP
NQGADFLEPTLKRLFPNPSSFMDMDAAAEAIVGSIQAGETIHVFADYDVDGASSAALLVR
WFRALGADLPIYVPDRLTEGYGPSPLAFDRLKASGADLVITVDCGAAANEAIAHACEIGL
KVVVIDHHMMREEPPACLAVVNPNRPGDTSGQGNLAAAGVVFVLLAALNREARKRGLFET
TPEPDIRQWLDLAALGAICDVTGLTGFNRALTGLGLKVMSGWANPGLKALLAVAGSEPGP
AKSNHAGFILGPRINAGGRIGRADLGARLLSTDDPLEAQALAEELDGLNVARREVEREVT
ETAIRRVEATGQHADGSAVVVVAGEDWHPGVVGIVAGRLRERWRKPVIVIGVDAVGNVGK
GSGRSQPGMNLGRAVQAAWREGLLLAGGGHAMAAGLTVRPDGIDALRTFLNVAMADEQVE
AEAMDWVEVDALIDPGAASRALFEDFERLAPYGPANPEPLFALSGVQAREPVAMNGGHVR
CRLGGPDGASVKAIAWRCADLPTGRALLNGQGGLSVVGRLKADDWNGRKGVQFEIEDVAD
PRMAS
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggagccccagccgccggtctcgcgccggggttcctcgacgtctcgcgctcg
ctgtcgggtcgagcctggcgacagcgcccggccgaggcctcgaccatccgcgcccatatg
cagacgctgggcctgtccgagcctctggcgcgcgccctggcctcgcggggcgtggggccg
aaccagggcgcggacttcctcgagccgacgttgaagcggctctttcccaatccgtcgtcc
ttcatggacatggacgcggcggccgaggccattgtcggttcgatccaggcgggggagacc
attcatgtcttcgccgactatgacgttgatggagcctccagcgcggcgcttctggtgcgc
tggttccgcgcgctgggcgccgacctgcccatctatgtccccgaccgtctgaccgagggc
tatgggccgagcccgctggccttcgaccggctgaaggcgtcgggcgccgatctggtcatc
acggtggattgcggcgcggcggccaacgaggccatcgcccatgcctgcgagatcgggctg
aaggtcgtggtcatcgaccaccacatgatgcgcgaggagccgccggcctgtctggcggtc
gtcaacccgaaccggccgggcgacacgtcgggtcagggcaatctggcggcggcgggggtg
gtcttcgtccttctggccgccctgaatcgggaggcccgcaaacgcggcctgttcgagacg
acgcccgagcccgacatccgccagtggctggatctggcggcgctgggcgccatctgcgac
gtcacgggcctgaccgggttcaaccgcgccctgacggggctggggctgaaggtcatgtcc
ggctgggccaatccggggctgaaggccctgctggccgtggcaggctcggagcccggtccg
gccaagtcgaatcacgctggcttcatcctggggccgcgcatcaacgccggaggccgaatc
ggccgggccgatctgggcgcgcgcctgctctcgaccgacgacccgttggaggctcaggcc
ctcgcggaagaactggacggcctcaacgtcgcccgtcgcgaggtcgagcgcgaggtcacc
gagaccgccatccgccgcgtggaggcgaccggccagcacgccgacggttcggccgttgtc
gtcgtcgcgggcgaggactggcaccccggcgtggtcggcatcgtggccgggcggctgcgc
gagcgctggagaaagccggtcatcgtcatcggcgtggacgcggtcggcaatgtcggcaag
ggctccggacggtcccaacctggcatgaacctgggtcgggcggtgcaggcggcgtggcgc
gagggcctgctgctggccgggggagggcacgccatggcggcgggcttgaccgtgcgcccg
gacggaatcgacgctcttcgcaccttcctcaacgtcgccatggccgacgaacaggtcgag
gcggaggccatggactgggtcgaggtggacgccctgatcgaccccggcgcggcgtcgcgc
gccctgttcgaggatttcgagcggctggccccctatggtccggccaaccccgagcccctg
ttcgccctcagcggcgttcaggcccgcgagcctgtcgccatgaacggcggccacgtgcgc
tgtcgtctgggggggccggacggcgcctcggtgaaggccatcgcctggcgctgcgccgac
ctgccgacgggccgtgcgctgctgaacgggcagggtggattgagcgtcgtgggtcgtctg
aaggcggacgactggaacggccgcaagggcgtgcaattcgagatcgaggacgtcgccgac
ccgcgtatggcgagttag
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