Brevundimonas staleyi: ACETK8_11685
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Entry
ACETK8_11685 CDS
T10734
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bsta Brevundimonas staleyi
Pathway
bsta03030
DNA replication
bsta03430
Mismatch repair
bsta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACETK8_11685 (dnaE)
03430 Mismatch repair
ACETK8_11685 (dnaE)
03440 Homologous recombination
ACETK8_11685 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsta03032
]
ACETK8_11685 (dnaE)
03400 DNA repair and recombination proteins [BR:
bsta03400
]
ACETK8_11685 (dnaE)
Enzymes [BR:
bsta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACETK8_11685 (dnaE)
DNA replication proteins [BR:
bsta03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACETK8_11685 (dnaE)
DNA repair and recombination proteins [BR:
bsta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACETK8_11685 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Endonuclease_NS
Motif
Other DBs
NCBI-ProteinID:
XGJ10241
LinkDB
All DBs
Position
complement(2300942..2304394)
Genome browser
AA seq
1150 aa
AA seq
DB search
MTDTPAETGFVHLRVRSAYSLLEGAIKAGKVGKLAADAGMPAVAVADRVNLFGALEFSEA
SKGVGVQPLIACALPVTGIGGKRAERWSKIPTVVLICQSETGWRNLCALSSEAFLLAGDE
EPNVAWSRVAELSEGLILLSGGPDGPVDPLFVQNKPGEAAEALAAMAQVFGDRFYVELQR
HGLPDEAAAERGLVEWAYAHDVPLTATNDAYYAKRDQAKSHDALLCIADGAFTGQEDRRR
ITDQHYFKSAPEMRTLFADLPEACDTTIEIAKRCAFLVKTHPPILPRFDTGDGRSEPDEL
MHQAKEGLKARLKQVTPAVPEQEYWDRLEWEVGIIVQMGFPGYFLIVSDFIKWAKTHSIP
VGPGRGSGAGSLVAWALTITDLDPLRFGLLFERFLNPERVSMPDFDIDFCQERREEVITY
VQEHYGKDRVAQIITFGTLQARAVLRDVGRVLQMPLGQVDRLCKMVPNNPANPTTLAQAI
DLEPRLREARDAEKSVANLLSTALELEGLYRNASTHAAGIVIGDRPLVELVPLYQDPRST
IPASQFNMKWVEPAGLVKFDFLGLKTLTTLDRAYGYLSRRGAAPVWNQLPLDDKATYELM
ASGQTVGVFQLESQGMRDTLRKMRCGSIEEITALISLYRPGPMEMIDTYIDRKFGRAEVD
YLHPSLKEVLTETYGVIIYQEQVMKIAQILAGYSLGEADLLRRAMGKKKKEEMDFQKARF
IKGASEKSVPEQQSDSIFELVAKFAGYGFNKSHAAAYALISYQTGWLKANHPVEFFAASM
SLDLSNTDKLAVFYQDARKFEIPVRAPDVNESSADFDVRWEDGKGAVLYALGAIRNVGLE
AMKHLVEVRETGGRFTDIFDFLERVDPRAVNKRALEGLARAGAFDSIHPNRRQLFEQADV
LMAYCQSVAADRNSLQESLFGADQAGASRPRLKNVEPWVGPERLDQELSAVGFYLSGHPL
EDMESALRRKRVTFVAEAVQRAEQGHDAFMMAGVVRRRQERASAKSGEKFAFVTFSDPTG
EFECLFPPEQLRASREMLEVGAHLMVRVRAKSSDGEVRFFGDGVSKLDTLVDDASAGLRV
HVSARSTDASALQARLERAKAEGKGGEITLIASLDGRREVEMRLPGRYRLDGALRGALKS
APGVLMLEDA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atcaccgacacgcccgcagagaccggtttcgtccatctgagggtccgctcggcctattcg
ctgctggaaggcgcgatcaaggcgggcaaggtcgggaagctggcggccgatgcgggcatg
cccgcggtcgccgtggccgaccgggtcaatctgttcggggcgctggagttctccgaggcc
tccaagggcgtcggggtgcaaccgttgatcgcctgtgcgctgccggtcaccggcatcggc
ggcaaacgggccgaacgctggtccaagatcccgaccgtcgtcctgatctgccagagcgag
accggctggcgaaacctctgcgccctgtcgtccgaagccttccttttggccggggacgag
gagccgaacgtcgcctggagccgggtcgcggaactgtccgaggggctgatcctcttgtcc
ggcggtccggacggtccggtcgatcccctgttcgtgcagaacaagccgggcgaggcggcc
gaggccctggccgccatggctcaggtcttcggcgaccgcttctatgtcgaactgcaacgc
cacggcctgccggacgaggcggcggccgagcgcggtctggtcgaatgggcctatgcccac
gacgtccccctgaccgcgaccaacgacgcctattacgccaagcgggatcaggccaagtcg
cacgacgccctgctgtgcatcgccgacggcgccttcaccggtcaggaagaccggcgccgc
atcaccgaccagcactacttcaagtccgcgcccgagatgcggaccctgttcgccgacctg
cccgaggcctgcgacacgaccatcgagatcgcgaaacgctgcgccttcctggtcaagacc
cacccgccgatcctgccgcgcttcgacaccggcgacggccgctccgagcccgacgagctg
atgcaccaggccaaggagggcctgaaggcgcgactgaaacaggtcacgcccgccgtgccg
gagcaggaatactgggaccggctggagtgggaggtcgggatcatcgtccagatgggcttc
cccggctatttcctgatcgtgtcggacttcatcaaatgggcgaagacccattcgatcccg
gtcggaccggggcgggggtcgggcgccgggtcgctggtcgcctgggccctgaccatcacc
gacctggatcccttgcggttcggcctgctgttcgagcggttcctgaaccccgaacgcgtc
tccatgcccgacttcgacatcgacttctgccaggagcggcgggaagaggtgatcacctat
gtgcaggagcactacggcaaggaccgggtcgcccagatcatcaccttcggcacgcttcag
gcgcgggccgtgctgcgcgatgtgggtcgggtgctgcagatgccgctgggtcaggtcgac
cggctctgcaagatggtgccgaacaacccggccaatcccacgaccctggcccaggccatc
gatctggagccgcgcctgagggaggcgcgcgacgccgagaagtcggtggcgaacctcttg
tccacggcgctggagcttgaaggcctctaccgcaacgcctcgacccacgccgccggcatc
gtcatcggcgaccgtcctttggtcgaactggtgccgctgtatcaggacccgcggtccacc
atcccggccagccagttcaacatgaagtgggtcgagccggcgggtctggtgaagttcgac
ttcctgggcctgaagaccctgacgacgctggaccgggcctacggctatctgtcccggcgg
ggtgcggcgccggtctggaaccagctgccgctcgacgacaaggcgacctacgagctgatg
gcgtccggccagacggtcggggtgttccagttggaatcccaggggatgcgcgacaccctg
aggaagatgcgctgcggctccatcgaggagatcaccgccctgatctccctctaccggcct
ggaccgatggagatgatcgacacctatatcgaccggaagttcggccgggccgaggtcgac
tatctgcacccttcgctgaaggaggtgctgaccgagacctatggggtcatcatctaccag
gaacaggtgatgaagatcgcccagatcctggccggctattcgctgggcgaggccgacctt
cttcgccgcgccatgggcaagaagaagaaggaggagatggacttccagaaggcgcgcttc
atcaagggcgcgtccgagaagtcggttccggaacagcagtcggactcgatcttcgaactg
gtggccaagttcgccggctacggcttcaacaagtcccacgccgccgcctacgccctgatt
tcgtatcagacgggctggctgaaggcgaaccacccggtcgagttcttcgccgcctcgatg
tcgctcgatctgtcgaacaccgacaagctggcggtcttctatcaggatgcgcgcaagttc
gagatcccggtccgggcgccggacgtgaacgagagctcggccgacttcgacgtgcgctgg
gaggacggcaagggggcggttctctatgccctgggcgccatccgaaacgtgggcctggag
gccatgaagcatctggtcgaggtgcgcgagaccggcgggcggttcaccgacatcttcgac
ttcctggagcgggtcgatccgcgcgcggtcaacaagcgggcgctggaaggtctggcgcgg
gccggcgccttcgacagcatccacccgaaccggcgccagctgttcgaacaggccgatgtg
ctgatggcctattgccagagcgtggcggcggaccggaactccttgcaggaatccctgttc
ggcgccgatcaggccggggcctcgcggccgcgcctgaagaatgtcgagccctgggtcggg
ccggaacggctggatcaggagttgtcggcggtcggcttctacctgtccggccatccgctg
gaggacatggagagcgcgctgcgtcgcaagcgcgtgaccttcgtcgccgaggcggtgcag
cgcgccgaacagggccacgacgccttcatgatggcgggcgtcgtgcgccgtcgtcaggaa
cgggccagcgccaagtcgggcgagaagttcgccttcgtcaccttctccgacccgaccggc
gagttcgaatgcctgttcccgccggaacagcttcgggcctcgcgcgagatgctggaggtc
ggcgcccatctgatggtccgggtgcgggccaagtcctcggacggcgaggtgcggttcttc
ggcgacggggtgtcaaagctggatacgctggtcgacgacgcctcggcgggcttgcgggtc
catgtgtctgcgcgatcgaccgacgcctcggccctgcaggcccgactggaacgagcgaaa
gcggaaggcaagggaggcgagatcaccctgatcgcctcgctggacggacggcgcgaggtc
gagatgagattgcccggccgataccggctggacggagcgctcaggggcgcgttgaaatcg
gcgcccggcgtgttgatgctggaagacgcctga
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