Brevundimonas staleyi: ACETK8_17935
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Entry
ACETK8_17935 CDS
T10734
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bsta Brevundimonas staleyi
Pathway
bsta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACETK8_17935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsta03019
]
ACETK8_17935
Enzymes [BR:
bsta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACETK8_17935
Messenger RNA biogenesis [BR:
bsta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACETK8_17935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Helicase_RecD
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
XGJ07919
LinkDB
All DBs
Position
3576234..3577748
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AA seq
504 aa
AA seq
DB search
MSASFESFGLNKAILQALTTEGYVTPTPIQTQAIPSVMTGKDLLGIAQTGTGKTAAFALP
ILHRLAENRTAPLPRTTRALVLSPTRELATQIAESFKAYGRHLGFKVAVVFGGVKYGPQE
RALQGGLDVLVATPGRLLDHMQQKTLDLSSTEIFVLDEADQMLDLGFVKPIRQIVARIPA
KRQNLFFSATMPSEIGKLAGELLKEPVKVQVTPQSTTVERINQSVIHIEQGRKRALLTEM
FADPNYSRCLVFTKTKHGADKVAAYLEAGGVLAGAIHGNKSQPQRERTLAAFKAGKLRVL
VATDIAARGIDVDGVSHVVNFELPFVPEAYVHRIGRTARAGKDGSAVSFVAGDEMKLLRD
IEKVTRQKIPASDRRNDRSLQLLDQSIMASGVASKASMPDDGRGDRQQKRGPRNPHRDGV
KKEHGGQPHRVRKGGGQRDRTHHGERGDRPVASTAPFDPMAADRARAAASANRPQAEAKP
DGEIRRRPRGRRPSNGGKGYAAKG
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctcctttgaatccttcggcctgaacaaggccatcctccaggccctgacgacc
gagggctatgtcaccccgaccccgatccagacccaggccatcccctcggtcatgaccggc
aaggacctcctgggcatcgcccagaccggcaccggcaagaccgcggccttcgccctgccg
atcctgcatcgcctggccgagaaccgcaccgcccccctgccgcgcacgacccgcgccctg
gtcctgtcgccgacgcgcgaactggccacccagatcgccgagagtttcaaggcctatggc
cgtcacctcggcttcaaggtcgcggtcgtcttcggcggcgtgaaatacggcccgcaggag
cgcgccctgcagggcggtctggacgtcctggtcgccacgcccggccgcctgctggaccac
atgcagcagaagaccctggatctgtcctcgaccgagatcttcgtcctggacgaagcggac
cagatgctggacctcggcttcgtcaagccgatccgtcagatcgtcgcccgcatcccggcc
aagcgccagaacctgttcttctcggccaccatgccgtcggagatcggcaagctggccggc
gagctcctgaaggagccggtcaaggtccaggtcacgccgcagtcgaccacggtcgaacgc
atcaaccagtcggtcatccacatcgaacagggcaggaagcgcgccctgctgaccgagatg
ttcgccgatccgaactactcgcgctgcctggtcttcaccaagaccaagcacggcgccgac
aaggtcgcggcctatctggaagccggcggcgtcctggccggcgccatccacggcaacaag
tcccagccccagcgtgagcgcaccctggccgccttcaaggccggcaagctgcgcgttctg
gtcgccaccgacatcgccgcgcgcggcatcgacgtggacggcgtctcgcacgtcgtgaac
ttcgaactgcccttcgtgccggaagcctatgtccaccgcatcggccggacggcccgcgcg
ggcaaggacggctcggcggtcagcttcgtggccggcgacgagatgaagctgctgcgcgac
atcgagaaggtcacgcgccagaagattccggcctccgaccgtcgcaacgaccgttcgctg
cagctgctggatcagtcgatcatggcctcgggcgtggcgtcgaaggcttccatgcccgac
gacggccgcggcgatcgccagcagaagcgcggcccgcgcaacccgcaccgcgacggcgtg
aagaaggaacacggcggccagccgcaccgcgtccgcaagggcggcggccagcgcgaccgc
acgcatcacggcgagcgtggagatcgtccggtcgcctcgaccgcgccgttcgatccgatg
gccgccgaccgcgcccgcgccgcggcctccgccaaccgtcctcaggccgaggccaagccc
gacggtgagatccgtcgccgcccgcgcggccgtcgcccgtcgaacggcggcaagggctac
gcggccaagggctga
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