Bacteroides stercoris: K6V31_03245
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Entry
K6V31_03245 CDS
T07883
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bste
Bacteroides stercoris
Pathway
bste03030
DNA replication
bste03430
Mismatch repair
bste03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K6V31_03245 (holA)
03430 Mismatch repair
K6V31_03245 (holA)
03440 Homologous recombination
K6V31_03245 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bste03032
]
K6V31_03245 (holA)
03400 DNA repair and recombination proteins [BR:
bste03400
]
K6V31_03245 (holA)
Enzymes [BR:
bste01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K6V31_03245 (holA)
DNA replication proteins [BR:
bste03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K6V31_03245 (holA)
DNA repair and recombination proteins [BR:
bste03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K6V31_03245 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
POTRA_1
PTA_PTB
HTH_57
Motif
Other DBs
NCBI-ProteinID:
UBE41879
LinkDB
All DBs
Position
741399..742418
Genome browser
AA seq
339 aa
AA seq
DB search
MAKQEITCDDILRELKAGQYRPIYYLMGEEPYYIDLISDYITDNVLNETEKEFNLTVVYG
ADVDVAAIINAAKRYPMMSEHQVVVVKEAQNIRNIEELSYYLQKPLLSTILVICHKHGVL
DKRKKLAAEIEKSGILFESRKVKESQLPAFITSYMKRKGIDLEPKATSMLADFVGTDLSR
LTGELEKLIITLPKGQTRVTPEQIERNIGISKDYNNFELRSAIVEKDVLKANRIIKYFEE
NPKTNPIQMTLSLLFGFFSNLMLAYYAPEKSEQGIAAFLGLKSPWQSREYLNAMRMYNGI
KTMQIIGEIRYTDAKSKGVGNPSLNDSDLLRELVFKILH
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcaagaaattacgtgcgatgatatcttaagggaactgaaagccgggcaatat
cgtcccatctattacctgatgggcgaagaaccgtattacatcgacctcatctcggattat
ataacggacaacgtactgaatgaaaccgaaaaagaattcaacctcaccgttgtatatggc
gcagatgtggacgtggctgcaattatcaatgccgccaaacgctatcccatgatgtccgag
caccaagtggtagtagtgaaggaagcacagaacatacgcaatatagaagagctttcctac
taccttcaaaagcccttgctatctacaatattggtaatatgccacaaacatggcgtattg
gataaaaggaaaaaactcgcagctgaaatagagaagtcgggcatactgtttgagtccagg
aaagtgaaagaatcccaactgccggcattcatcacatcctatatgaaacgtaaaggaata
gaccttgaaccgaaagccacttccatgcttgccgacttcgtagggacagacctcagccgc
cttaccggagaactggaaaaactgattattacacttccaaaaggtcagacacgtgtcacc
cccgaacagatagaacgcaacataggaatcagcaaggattataataactttgaactccgc
agcgccatcgtggaaaaggatgttctaaaggctaacagaataataaaatattttgaagaa
aatccgaaaaccaatccgattcaaatgactttatctttacttttcggattcttttccaat
ctgatgctggcctattatgcccccgaaaaatcggagcaaggcatcgcagcattcttaggt
ctgaagagcccgtggcagtcccgcgaatatctaaatgccatgaggatgtacaatggaata
aaaaccatgcagatcatcggagagatacgatatacagatgccaagtctaaaggagtagga
aacccttccttaaacgatagcgaccttttacgggaattggtctttaaaatcctgcattga
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