Bacteroides stercoris: K6V31_04090
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Entry
K6V31_04090 CDS
T07883
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bste
Bacteroides stercoris
Pathway
bste02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bste00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6V31_04090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bste03021
]
K6V31_04090
Transcription machinery [BR:
bste03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K6V31_04090
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_10
HTH_24
HTH_30
HTH_20
Motif
Other DBs
NCBI-ProteinID:
UBE42034
LinkDB
All DBs
Position
complement(957307..957915)
Genome browser
AA seq
202 aa
AA seq
DB search
MEAAMKDTLIIEHLRRGDEEAFKYIYERHYVLLCRFANQILNDAALSEEVVDDAIFYLWE
HRREIEITYSVRAYLMRAVRNRCLNELQSLRHREELHFSSFMLPENMDFLDSVFVEENQP
LGVLLERELEDELTRSIEELPVECRTVFKKSRFEQKKYEEIALELGISINTVKYHIKNAL
SLLQKRLDNYLHLLIIYIFMDI
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggctatgaaagacacattaattattgagcatttacgtaggggggatgaagaa
gcatttaagtacatttatgaacgtcattatgttctgctttgccgctttgccaatcagata
ttgaatgatgcagctctttcggaagaggtggtggacgatgctatattttatttatgggag
catcgtcgggagatagaaatcacgtattctgtccgtgcttatctgatgcgcgctgtacgt
aatcgttgtctgaatgaattgcaatccttgcgtcatcgtgaggaactgcatttctcatct
tttatgttaccggaaaatatggattttcttgattctgtttttgtggaagagaatcagccc
ttgggtgtattgctcgaacgggagttggaagatgagttgacccgcagtatagaagaactg
cctgtggaatgtcgtaccgtatttaagaaaagtcgttttgaacaaaaaaagtacgaagag
attgctttagagttgggaatctccatcaatacggttaagtatcatataaagaatgcttta
tctcttcttcaaaagcgtttggacaactatttgcatttattgattatttatatttttatg
gatatctga
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