Bacteroides stercoris: K6V31_05060
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Entry
K6V31_05060 CDS
T07883
Name
(GenBank) collagen-like protein
Organism
bste
Bacteroides stercoris
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
DUF3672
CBM_5_12
Motif
Other DBs
NCBI-ProteinID:
UBE42212
LinkDB
All DBs
Position
complement(1171440..1175276)
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AA seq
1278 aa
AA seq
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MVDIKDIFGKTRFSTPINAGAKGRFTLMKEDYIILPFSVPDPVYFKLGDYVDLSGVLDES
LGGLLSKVYEIVDLQKPAFNASTGGYDYELRMDAYYWKWKNKIFKYTPEHAGHEASWSLT
APLDVQLGVFLRNLKALGYTYKGKEFEFSIDSTVENKAVAMRYDNINLLDALFSMADKEK
WDCDCWITDNIIHFGRNEYGDSVRIELGVEASAMTRSDSKGTYATRIYAFGSTRNIPANY
RPVDEQTVVNGVVQRRLMLPADTPYIDVYPDMSEEEAIEDIVVFENVYPRRTGTLSDVHT
RTEEVKDENGTKETVTYYRYKDTGLEFKDEYLIEGQELRIRFQSGKLNGMEFGVIFNPDP
KDDMRGAQLWEIVRNEDYGRMLPDDTLRPENGDEYVLSGFNIQLVSDRYTPEAEQELKGK
AQEYADRRKRDDGTYNTTLDSEWVYNDRLRRFYEFGQKVFLVNRAFFENGRDSRILGWEF
NLDKPWDSPTYILGESMPYSRIGDMEDKIDSLTYKGQTYTGGGNGVYIIRTNDTTAPSDS
NVFSARRSLVSFLRKDKSDETKFLLKLFAGAVFGKDGYASGLAGFGAQIDENGNAEVESL
TSRRFIETPELRHNRIDIKVGDKWRAPGAGVLKSVDTENKLCALKLEEGEIGAVAVGDIC
MGIFHSLTSSENATEDTDDSQGNRTFAGFCTVYFTITEVIGDRNEQFKYQIRPVSDRWKF
SFEPFEQMNFVAYGSFTRADRQTSVYETRTYSRMLRNQNTWEISAANIAMQSGDLSNLNV
HGLDMTGYSMYLNSVYFTGTVRQLKPDGTPVYTANDRGEWASGENYAFYDRVSHDGGIWL
CVSESGSASEPAEGNSDWLQQVKPGTDGTDGKNGQDGAPGRDGQDGAPGKDGADGAPGRD
GVDGAPGQDGISVSNHGKWHTGLKTPYLGLVKMGGKVFLCKVRNGTSNPPMWTVTTKDGR
RILQTQDGGKTYGYILTGEYNSEEYDMVVENGENGLQGCILRKAEWVSGVEWRNDESLAG
GTRYVDVALVRDNGTETGWRAYKCRVTHISSGGNAPGNSTYWEEFGLNTAAIFTSLIVAK
NAMIDFMQGNELRIRKDDGTVTAGLSGSQSGEKIRIWAGSSTPDDAPFRVTEDGKVHAEN
AEITGEVNATGGTFKNIKSPNNSFVIKENGDIEITGKVSTSMNGKRIVIDSATNSLRMYG
SDNLLAGTIDFIGEGGSTYPRMKLIEYVSGNPRYTVLIRPQLINVSENDGNDFYDVMINT
NGISFLKNNVVTKSYPNK
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggtagacatcaaagacatattcggtaagacaagattttcgacccccattaatgctggg
gctaaaggcaggtttaccctgatgaaggaagactatatcatccttccgttcagtgttccc
gacccggtgtatttcaagctcggcgactacgtggatttgtcgggagtgcttgacgagtcc
ctgggtggactgctgtccaaggtctatgagatagtggatttgcagaaacctgccttcaac
gcttctaccgggggatatgactatgagctgcgcatggatgcgtattactggaagtggaag
aacaagattttcaagtacactcccgaacatgccggccatgaggcttcatggtctctgact
gcaccccttgatgtgcagctcggcgtattcctccgcaacctgaaggcactcggatatacg
tacaagggaaaagagtttgagttcagcatagattccacagtggagaacaaggccgttgcg
atgaggtacgacaatataaaccttcttgacgccctgttctccatggccgataaggagaaa
tgggactgtgattgctggataacggataacataatccattttgggcgaaatgaatatggt
gattccgtcagaatcgagttaggggttgaagcgtcagccatgacccgcagcgacagcaaa
ggtacttatgcgaccagaatctatgcgttcggctctacccggaatatcccggcaaactac
cgtcccgtggacgagcagacggttgtcaacggcgtagtccagcgcagactgatgcttccc
gcggacacgccttacattgatgtgtatcccgacatgtccgaagaggaggcgatagaggat
attgtcgtatttgaaaatgtctatccccggcgtacgggcacattatccgacgtgcatacc
cgcaccgaagaggtgaaggacgagaacggcacgaaagagaccgtcacctactaccgctac
aaggataccgggctggagttcaaggatgaatatcttatcgaaggccaggaactgagaatc
cggttccagtccggcaaacttaacggcatggaattcggtgtcattttcaatcccgacccc
aaagacgacatgcgcggcgcacagctttgggaaatcgtgagaaacgaggattacgggcgt
atgcttcccgatgatacccttcgtccggaaaacggcgacgagtatgtcctttccggtttc
aacatccagcttgtgtctgacagatataccccagaagccgaacaggagcttaagggaaag
gcgcaggagtatgccgaccgacgcaaaagggatgacggtacatataacacgacccttgat
tccgaatgggtgtataacgaccggctgagacgcttctatgagttcggacagaaagtgttc
cttgtaaacagggctttttttgagaacgggcgcgacagccgcatactcggctgggagttt
aaccttgacaagccctgggacagccctacatacatactcggcgagagcatgccctattcc
cgtatcggagatatggaagacaagattgattccctgacctacaaggggcagacatatacc
ggcggcggaaacggggtctatataatcaggacgaacgatacgacagccccttccgatagc
aatgtattctcggcacgcaggtctctggtctcttttttaaggaaagacaagtctgacgag
acgaaatttcttttgaagcttttcgctggtgcggtattcggtaaggacggctatgcttcc
ggacttgcaggctttggtgcccaaatagatgaaaacggcaatgcggaagtagaatcgctt
acctctcgacgcttcatcgaaacgccggaactacgtcacaatcgtattgatataaaagtc
ggtgacaaatggcgtgctcctggtgctggtgtactgaaatcggtggatactgaaaacaag
ctctgtgcattaaaactggaggaaggagaaatcggtgcggtggcggttggtgacatctgc
atgggtatctttcattcgcttacctcttcggaaaatgctacggaagatacggacgacagt
cagggaaaccggacttttgccggtttttgtacggtatatttcaccattaccgaagtcatc
ggcgataggaatgaacagttcaagtatcagattcgcccagtgtcggatagatggaagttc
tcttttgagccttttgagcagatgaattttgtagcatatggtagtttcacacgtgccgac
cgtcagacatccgtatatgagacacgcacctacagccgcatgctccgcaaccagaatacc
tgggaaatatcggccgccaacatcgcaatgcagtcgggcgacctctcaaacctgaacgta
cacggtctggatatgacgggatactccatgtacctgaacagcgtgtactttaccggtacg
gtacggcagctgaaacctgacggtacaccggtatatacggccaatgaccgtggagagtgg
gcatccggtgaaaattatgccttttatgaccgggtttcccatgatggcggcatttggctg
tgtgtaagcgagagcggcagtgcatctgaacctgcagaaggaaattcggactggttgcaa
caagtgaaaccgggaacggacggaactgatggcaagaacggtcaggatggcgctccggga
agggacggtcaggacggtgctcctggtaaggacggagcggatggtgcaccgggcagggac
ggcgtggacggagcaccgggacaggatggcatttcggtcagtaaccacggaaaatggcat
accggccttaagacaccttacctcggactggtgaaaatgggtggaaaggtgtttttatgc
aaggttagaaacggaacgtcaaatccacccatgtggacggttaccaccaaggacggaaga
cgtatactccagacgcaggacggtggaaagacctatggctacatactgaccggcgagtac
aactccgaagagtacgatatggtggtggaaaacggggagaacggcctgcagggatgtata
ctccgcaaggctgaatgggtgtccggagtagagtggcgtaacgatgagtcactggctggc
ggtacacggtacgtcgatgtggcattggtcagggataacggtacggagactggttggcgg
gcatacaagtgccgggtgacgcatataagtagcgggggaaatgcgccgggaaacagtacg
tattgggaagagttcggacttaatacggcagccatattcacatcgcttattgttgctaaa
aatgcgatgatagacttcatgcaggggaacgaacttcgtattagaaaggatgacgggacg
gtgactgccggccttagcggttcccaatccggtgaaaagatacggatatgggcaggtagt
tctactcctgatgatgcccccttccgggttactgaagacggaaaagtacatgcagaaaat
gcggaaataaccggagaagtcaatgcgacaggcggtacttttaaaaatatcaagtcgccc
aataactcctttgttattaaagaaaacggggacatagaaataaccggcaaggtatccacc
tctatgaacggaaagcgtattgtgattgattcagctacgaacagtcttagaatgtacggc
tccgataatctgttggcgggaactatagatttcatcggtgaaggtggtagtacatatccc
cgtatgaaattaatcgagtatgtttccggaaatccaagatatactgttttaataagacct
cagctaataaatgtatcagagaatgatggcaatgacttttatgatgtcatgataaataca
aatggaataagctttttaaaaaataatgtggtaactaaatcttatcctaataaataa
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