Bacteroides stercoris: K6V31_07540
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Entry
K6V31_07540 CDS
T07883
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
bste
Bacteroides stercoris
Brite
KEGG Orthology (KO) [BR:
bste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bste03016
]
K6V31_07540
Enzymes [BR:
bste01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
K6V31_07540
Transfer RNA biogenesis [BR:
bste03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
K6V31_07540
Prokaryotic type
tRNA splicing ligases
K6V31_07540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
UBE42665
LinkDB
All DBs
Position
1724856..1726109
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AA seq
417 aa
AA seq
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MKTIERHNVKIFTDIIDKNAIEQIKQLLSINVFADKKIRIMPDVHAGAGCVIGFTGDLGD
KVIPNIVGVDIGCGMRVLNLGNVNDIDYHGLHEHIRTNVPSGKIAREDKFGFKPLIGEEM
EIYREAKELIKGLYCYRELKDISRIQKSIGTLGGGNHFIELDKDDIGNVYLVIHTGSRNL
GLQVANIYQEKAIKHLTDGADDLELRIKEIIEKYKATGRRSELKDVIKKIRKEQQHIAPA
LPTELCYVEGETRKYYLHDMSICQQWAVLNRKLISILLLKFFNGVEIKNEFESVHNYISD
DNMIRKGAISAAKGELCIIPLNMRDGSLICVGKGNTDWNCSAPHGAGRILSRNQAYEQIT
MKDFESSMNGIYSESINEFTRDEAPMVYKPIEAIIDNIGETVTIETIIRPIFNFKAM
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaatagaaagacataatgtgaaaatcttcacggacataattgataaaaatgcc
atagagcaaatcaagcaacttttatccataaatgtcttcgctgacaaaaaaatcaggatc
atgcctgacgtacatgccggtgccgggtgtgtaattggttttaccggagatctcggtgac
aaagtgattcccaatatagtaggagttgatataggctgcggaatgagggtattaaacctt
gggaatgtcaatgatattgattatcatggattgcatgaacatatccggacaaatgttcct
tccggtaaaattgctcgggaagataaattcggcttcaaaccgcttattggagaagaaatg
gaaatatatcgcgaagcaaaagaactgataaagggactttactgctaccgtgaattgaaa
gatattagtcgtattcaaaagtctatcggaacactcggtggcggcaatcattttatcgag
ctggacaaagatgatatagggaatgtatatctcgtgattcataccggatcgcgtaatctt
ggcttgcaggtggcgaacatttatcaggagaaagctataaaacatctgacagacggtgcc
gatgatttggaattgcgcatcaaagaaataattgaaaaatacaaggctactggcagaaga
agtgaactaaaagatgtcataaagaaaatacgtaaagagcaacaacacatcgctcccgct
cttcccactgaactttgttatgtggaaggtgaaacacgaaaatactatcttcacgatatg
agcatctgtcagcagtgggcagtattgaaccgcaaactgatttccattttattactcaaa
ttcttcaatggagttgagataaagaatgaatttgaatcagttcacaattatatatcggat
gacaacatgattcgcaaaggtgcaatctctgcagcaaaaggagaactgtgcattattccg
ctgaatatgagggacggctctctaatttgtgtcggtaagggtaatactgattggaactgt
tctgctccacatggtgcaggtagaatacttagccgcaatcaagcatacgaacaaatcacc
atgaaagattttgaatcctctatgaatgggatttactccgaatccataaatgaatttacc
cgggatgaagcacctatggtttataagcctattgaagcaatcattgataatatcggagaa
accgttactattgagactattattcgaccgattttcaatttcaaggccatgtga
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