Bacteroides stercoris: K6V31_09540
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Entry
K6V31_09540 CDS
T07883
Name
(GenBank) DEAD/DEAH box helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bste
Bacteroides stercoris
Pathway
bste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6V31_09540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bste03019
]
K6V31_09540
03400 DNA repair and recombination proteins [BR:
bste03400
]
K6V31_09540
Enzymes [BR:
bste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K6V31_09540
Messenger RNA biogenesis [BR:
bste03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K6V31_09540
DNA repair and recombination proteins [BR:
bste03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K6V31_09540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_25
AAA_22
Helicase_RecD
Cas3-like_C_2
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
UBE40083
LinkDB
All DBs
Position
complement(2244375..2246819)
Genome browser
AA seq
814 aa
AA seq
DB search
MMTQTGEAHRLPVLKERHLPGECRQSVTELLKETYGYDGFRNLEIYDDLFKNRDTLCISQ
GQLVENVIREAEKAYKGGEQPDNILLTAPTGAGKSLLFQLPAIYLGKEYNLLTIVVSPLK
ALIVDQVEGLQDVGYERVAYASSDLSPEQKMEVYRAVREGEIDLFYLSPELLLSYDIRHF
IGNRRIGMVVVDEAHTVTTWGKEFRVDYWFLGRYLDALKQNLGYSFPLFALTATAVWNPK
GGNDMVFDTIRSLQMEPCILYVGTVRRKNIGFDIRRLTLEEGETYDKGKQRVISGRVEEF
LDGHKALLYYPFAGGIDMRIKTWVAPADWRLVASYYGKKDKAQKAAIVRDFKEGTKRMIV
ATKAFGMGVDISDIDRVYHVAPSSTFVDYIQEIGRAARDADVQGIAATDYHERDFYYMKR
LHQTGNIGQDQLELILKKLMEVYRMKGKKEEILVSLSDFEFVVKLPRTKNKLEYEAELGQ
LIKTALLWLEDDLEQRYGTRLLEVSPQNLLTEGYIQDKTGDAFAREFQVYLTGVDGEEGV
YRARLDTLWEERFPELGYREFKQKLNSGMLWEGSRAVSVGKHEVLLKEDATVIRQRMDAL
FKSLVSMLKTALLKSKGRFDEEELRAVFAEHGMDVPSAKRFIGSLLESRTEEGRSVSYIS
SVKKKDSNELSFTVTKGFDLLLSRYQKLFAQRIAGNRGDRLQFYCTPFSDLNMLLNLLSM
LDCLSFSVEGGGTPCVHVRFDNPELLQQLADSDEYHNLILDTNERIFEEQIELFSFFFGT
DTLTDSQRWDFVEEYFTGTTVEELKKKYGGSRPV
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgatgacacaaacaggagaggcacatcgcttgcccgtattgaaagaacgccacttgccc
ggggagtgccggcaaagtgtaacggaattgctgaaagagacctatggttacgacgggttc
cgcaatcttgagatttacgatgatttgtttaaaaacagggatactctctgtatttctcag
ggacaactggttgaaaatgtaatccgggaagcggaaaaggcgtacaaaggcggcgaacag
cccgacaatatcctgctgactgctccgaccggtgcgggaaagtctctcttgtttcagctt
cccgccatctatctgggaaaagaatataacctgctgactatcgttgtctctcctttgaaa
gcgctgatagtggaccaggtggaaggcttgcaggacgtagggtatgaacgtgtggcatat
gcgtcttccgacctttcgccggagcagaagatggaagtgtaccgggcggtgcgtgagggg
gaaatcgacttgttctatctttcgccggagctgttgctctcctacgacatcagacatttt
atcggcaaccgccgcatcggtatggttgttgtcgatgaggcgcatacggtaaccacctgg
ggcaaagagttccgcgtggactattggtttctgggacgttatttggacgcattgaaacag
aacctcggttattcgttccccctgtttgcccttaccgccactgccgtgtggaatcccaaa
ggcggcaacgatatggtattcgataccatccgctccctgcaaatggagccttgcatactt
tatgtaggtacggtcaggcgcaagaacatcggttttgacatccgccggctcacattggaa
gagggagagacttatgacaaaggcaagcaacgcgtcatatccgggcgtgtggaggagttt
ctcgacgggcataaggcgctgctttactatccttttgccggtggcatagatatgcgtatc
aagacctgggtggctcctgccgactggcgtctggtggcctcttactacggcaagaaggac
aaggcgcagaaggctgccatcgtcagggactttaaagagggcacgaagcggatgattgtt
gctacaaaagctttcggcatgggagtggacatcagcgacatcgaccgtgtttaccacgtg
gcgccttccagcacgtttgtcgattacattcaggaaataggccgtgccgcccgtgatgcg
gacgtgcagggtattgccgccaccgattatcacgaacgcgacttttattacatgaagcgt
ctgcaccagaccggcaacatcgggcaggaccagttggaacttatcctgaagaaactcatg
gaggtatatcggatgaaagggaagaaggaagagatacttgtttccctgtccgactttgag
ttcgtggtgaagctgccgcgtaccaagaataagctggagtacgaggccgagttggggcag
cttatcaaaacggccctgctgtggctggaggatgatttggagcaacgctacggcacacgt
ctgctggaggtaagtccgcaaaatctgttgacggagggttacatccaggacaagacgggc
gatgcctttgcacgcgaatttcaggtctatcttaccggggtggacggtgaagagggagtc
taccgtgcccgtttggacactctttgggaagagcgttttccggagttgggatacagggag
ttcaagcagaaactgaacagcggcatgttgtgggaaggttcacgtgctgtttcagtgggc
aagcacgaggtgttgctgaaagaagatgcaacggttatccgccagcgcatggacgctttg
ttcaagagcctggtatcgatgctgaaaacagctttgctgaagtcgaaaggccgtttcgac
gaggaggagttgcgtgcggtgtttgccgagcacggcatggatgtgccgtcggccaaacgt
ttcatcggttcgttgctggaaagccgcaccgaggaggggcgcagcgtaagttacatcagc
agcgtcaagaagaaagactcgaacgagctctcgtttaccgtcaccaaaggtttcgacctg
cttctgtcccgttatcagaagctgttcgcccagcgtatcgcaggcaaccggggcgaccgc
ttgcagttctattgcactccgttctccgatttgaatatgttgctcaaccttctttccatg
ctcgactgcctgtcgttcagcgttgagggaggcggtacgccttgcgtgcatgtacggttc
gataacccggaacttctgcaacagttggcggattccgacgaatatcataatcttatactg
gacacgaacgaacgtatcttcgaggagcagattgagctgttctcctttttcttcggtacg
gatactctgaccgacagccagcgctgggatttcgtggaagagtatttcaccggaacaacc
gtggaggagctgaagaagaaatacggcggcagccggcccgtatga
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