Bacteroides stercoris: K6V31_09735
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Entry
K6V31_09735 CDS
T07883
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bste
Bacteroides stercoris
Pathway
bste02020
Two-component system
bste02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bste00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6V31_09735 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K6V31_09735 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bste03021
]
K6V31_09735 (rpoN)
Transcription machinery [BR:
bste03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K6V31_09735 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
SF3b1
HTH_IclR
Rx_N
Motif
Other DBs
NCBI-ProteinID:
UBE40116
LinkDB
All DBs
Position
2288513..2290003
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AA seq
496 aa
AA seq
DB search
MAQGSRQIQTQAQQQIQTLSPQQILVVKLLELPAIELEDRVRAELLENPALEEGKDDTSG
DEYSNTPDADSNAEDGGDTDYDSLSDYLNEDDIPDYKLQENNHSKGEQAEEIPFSDTTSF
YETLKEQLGERNLTEHQRELAEYLIGSLDDDGLLRKSLDSISDELAIYAGIEATTGELEE
ALRIIQDFDPAGLGARNLQECLLIQIRRKIEQQHFTPNPILYIEEAIISECYEDFTRKHW
DKIQQKLGLEEDAFQQAIKEICKLNPRPGASLGEAIGKNLQQIVPDFIVDTYDDGTINLS
LNNRNVPELRMSRDFTEMVEEHTKNKANQSKESKEAMMFLKQKMDAAQGFIDAVKQRQNT
LMTTMQAIIDLQRPFFLDGDESLLRPMILKDVAERTGLDISTISRVSNSKYVQTNYGIYP
LKFFFNDGYVTEDGEEMSVREIRKILKECIDNEDRKKPYTDDELTEILKEKGYPIARRTV
AKYRQQLNIPVARLRK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaggctcccgacagatacaaacccaagcgcagcagcagatacagacgctgtca
ccacaacagattctggtagtaaagctgttggaacttccggcaatagagctggaagaccgc
gtacgtgccgaacttctggaaaatccggcactggaagagggaaaagatgatacatccggc
gatgaatattccaatacccccgatgcagactccaatgcagaagatggtggagataccgat
tacgattctctgagcgactatctcaacgaggatgacatacccgactataaattacaggaa
aacaaccacagcaagggagaacaagccgaagagatacctttctccgatacgacttccttc
tatgaaaccctgaaagaacaactgggtgagcgcaaccttaccgaacaccagcgtgaactg
gccgaatatctcatcggctcattggacgacgacgggctgctgcgcaaatcactggacagc
atcagcgatgagcttgccatttatgccggcatcgaagccactaccggagaactggaagaa
gcattgagaatcattcaggatttcgaccctgccggattgggagcccgcaacttgcaggaa
tgccttctcatccagatacggcgcaagatagaacagcagcacttcactcccaatccgatt
ctttatattgaagaagcaatcatttccgaatgctacgaggatttcacccgtaagcattgg
gacaaaatacaacagaaactcgggctggaagaagatgctttccagcaagccataaaagaa
atctgcaaactgaatccgcgtccgggagcgtctttgggtgaagctatcggcaagaacctg
caacaaatcgtacccgattttattgtggatacctatgacgacggcactatcaacctgtcg
ctcaacaaccggaatgttcccgaactgcgcatgagccgcgatttcaccgaaatggtagag
gaacacaccaagaacaaggcaaaccagtccaaggaatccaaagaggccatgatgttcctg
aaacagaaaatggatgcagctcagggatttatcgatgccgtcaagcaacggcagaatacc
ctgatgactaccatgcaggccatcatcgacctgcaacgccctttctttctcgacggtgac
gagtcattgcttcgccccatgatattgaaagacgttgccgagcgcacaggactcgacatc
tcaaccatctcccgcgtcagcaacagcaaatatgtacagaccaactacggcatctacccg
ctgaagttcttctttaacgatggatatgttacggaagacggcgaagaaatgtcagtccgg
gagatacggaaaatactcaaggaatgcatcgacaacgaggacagaaagaaaccctatacc
gatgacgaactgaccgagatattgaaagagaaaggataccccattgcccgccgcaccgta
gccaaataccgccagcaattaaacattccggtagcaaggctgagaaaatag
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