Bacteroides stercoris: K6V31_09865
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Entry
K6V31_09865 CDS
T07883
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bste
Bacteroides stercoris
Brite
KEGG Orthology (KO) [BR:
bste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bste03032
]
K6V31_09865 (topA)
03400 DNA repair and recombination proteins [BR:
bste03400
]
K6V31_09865 (topA)
Enzymes [BR:
bste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K6V31_09865 (topA)
DNA replication proteins [BR:
bste03032
]
Prokaryotic type
DNA Topoisomerases
K6V31_09865 (topA)
DNA repair and recombination proteins [BR:
bste03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K6V31_09865 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
T7SS_EccA1_N
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
UBE40140
LinkDB
All DBs
Position
2321608..2323956
Genome browser
AA seq
782 aa
AA seq
DB search
MQKNLVIVESPAKAKTIEKFLGKDYKVLSSYGHIRDLKKKEFSIDIDKDFKPHYEIPGDK
KKVVEELKAEAKEAETVWLASDEDREGEAIAWHLYEVLKLQPEHTKRIVFHEITQSAILK
AIEQPRNIDINLVDAQQARRILDRIVGFELSPVLWKKVKPALSAGRVQSVAVRLIVERER
EIQAFQSEASYRVTAVFLVPDADGKPVEMKAELSRRIKTKAEAQKFLESCRSASFTIHDI
STRPLKKSPAAPFTTSTLQQEAARKLGFTVAQTMMVAQRLYESGKITYMRTDSVNLSELA
VDSSKAVIADMMGERYVYPRHFATKTKGAQEAHEAIRPTYMENAKIEGTPQERKLYDLIW
KRTIASQMADAEVEKTTVSIGISNEADTFNATGEVVKFDGFLHVYRESIDEDTEQEDETR
LLPPLKKGQVLHHQSIIATERFTQHPPRYTEASLVRKLEELGIGRPSTYAPTISTIQQRG
YVEKGEKSGEERSYNILSLQDSKITDVTQTEITGAEKAKLMPTDTGTVVNDFLMEYFPNI
LDYNFTASVEKQFDEIAEGEKKWTAILKDFYKDFHPSVENTLATKNAHKAGERILGEEPG
SGKQVSVKIGRFGPVVQIGTAGDNEKPRFAQLKKDMSIETITLEEALELFKLPRTLGEYE
GKTVTIGTGRYGPYVHNNGMYTSLPKTIDPLEITLAEAIQLIREKKDAEAQKHIKKFEEE
PELEILNGRYGPYISYKGSNYKIPKDIIPQDLNLDACREIIKLQSDPDAPKAKRGKYAKK
KK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaaccttgtcattgtcgagtctccggcaaaagctaagactatcgagaaattc
ctcgggaaagactataaagtcctttccagttacggtcatatacgcgatttgaagaaaaaa
gagttcagtattgatattgataaagatttcaaaccgcattatgaaattcctggagataag
aaaaaggttgtagaagagttgaaagccgaagccaaggaagcggaaaccgtatggttggca
tccgatgaggaccgcgagggagaagcgattgcatggcatttatacgaagtgctgaaactg
caaccggagcataccaagcgtatcgttttccacgaaatcacccaaagcgccattctgaaa
gccatcgagcaaccgcgcaatatcgacatcaatctggtagatgcccaacaggcgcgccgt
attctggaccgtatcgtaggttttgaactttcacccgtattgtggaaaaaagtgaaaccc
gcactctctgccgggcgtgtgcaatcggtagcagtccgtcttatcgtagaacgcgagcgc
gagatacaggctttccaatcggaagcatcgtaccgggtgaccgccgtattcctcgtgccc
gatgccgacggcaaaccggtggaaatgaaagccgagctgtcgcgccgtatcaagaccaaa
gccgaagctcaaaaatttctggaaagctgccggtcagcctctttcaccatccatgacatt
tccacccggccgctgaaaaaaagtcctgccgctcctttcactacatctaccttgcagcag
gaagctgcccgcaaattaggatttacagtagcacagaccatgatggtagcccagcggttg
tacgaatcgggaaagataacctatatgcgtaccgactccgtcaacctgtccgaactggcg
gttgacagcagcaaagcggtcattgccgacatgatgggagagcgctatgtatatccgcgt
catttcgccaccaaaaccaaaggcgctcaagaggctcacgaagccattcgccctacgtat
atggaaaatgccaagatagaaggtacgccgcaggaaagaaaactgtacgacctgatatgg
aagcgcacgatagcctctcaaatggcagatgcggaagttgagaaaacgaccgtaagcatc
ggcatcagcaacgaagcggatacgttcaatgcaaccggagaggttgtaaaattcgacggt
ttcctccacgtgtatcgcgagtctatcgacgaagacacggagcaggaggatgaaacccgt
ctgctgccccctttgaagaaaggacaggtcttgcatcaccagagcattattgctacggaa
cgcttcacgcaacatccgccccgttacaccgaagccagccttgtacgcaaattggaagaa
ctgggtatcggccgtccttccacatacgcccctaccatttcaaccatacagcaacgcggc
tatgtggagaaaggcgaaaagagcggggaagagcgctcttacaacatactttcattgcag
gacagcaagattacggacgttacgcaaacggaaattacaggagccgaaaaagccaaattg
atgcctaccgatacaggtacggtagtcaatgatttcctgatggaatatttccccaacatc
ctcgactataactttactgccagcgttgaaaagcagttcgatgagatagccgaaggagaa
aagaagtggaccgccatcctgaaggatttctataaagatttccacccgtccgtggaaaac
acgcttgccaccaagaatgcccacaaggccggcgaacgtatcttaggcgaagaaccgggc
agcggcaaacaggtatccgtaaaaatcggccgtttcggtcccgttgtacaaatcggtact
gccggagacaacgaaaagccacgctttgcccaactcaagaaagatatgtccattgagaca
ataacactggaagaagctttggaactgttcaagcttccccgcaccctgggcgaatatgaa
ggcaagacagtaaccataggaaccggacgctacggaccttatgtacacaacaacggaatg
tatacttcgcttccgaagacaatagatccgctggaaataacattggcagaggctattcag
ctcatccgggaaaagaaagatgccgaagcccagaaacatatcaagaaatttgaagaagaa
ccggagctggaaatattgaacggccgttacggaccgtatatttcttataaaggcagcaac
tacaaaatcccgaaggacattatcccgcaggatttaaacctggatgcatgcagggaaatc
atcaaactgcagagcgatcccgatgcaccgaaagccaaacgcggcaaatacgccaagaag
aaaaagtaa
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