Bacteroides stercoris: K6V31_11015
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Entry
K6V31_11015 CDS
T07883
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bste
Bacteroides stercoris
Pathway
bste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6V31_11015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bste03019
]
K6V31_11015
03009 Ribosome biogenesis [BR:
bste03009
]
K6V31_11015
Enzymes [BR:
bste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K6V31_11015
Messenger RNA biogenesis [BR:
bste03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K6V31_11015
Ribosome biogenesis [BR:
bste03009
]
Prokaryotic type
rRNA helicases
K6V31_11015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UBE40356
LinkDB
All DBs
Position
complement(2621055..2622989)
Genome browser
AA seq
644 aa
AA seq
DB search
MKTFEELGVSPEIRRAIEEMGYACPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLP
LIQQINVNNRIPQSLILCPTRELCLQIAGDLNDYSKYIDGLRVLPVYGGSSIESQIRALK
RGVHIIVATPGRLLDLMERKTVSLSTIQNVVMDEADEMLNMGFTDSINAILADVPQERNT
LLFSATMSPEIARISKKYLHNAKEITIGRRNEGTSNVKHVVFTVHAKDKYAALKRIVDYY
PQIYGIIFCRTRKETQEIADKLMQEGYNADSLHGELSQAQRDAVMQKFRIRNLQLLVATD
VAARGLDVDDLTHVINYGLPDDTESYTHRSGRTGRAGKTGTSIAIINLREKGKMREIERI
IGKKFIQGEMPTGKQICEKQLLKVIDELEKVKVNEDEIRDFMPDIYRKLDWLSKEDLIKR
MVSLEFNRFLDYYRDREEIEIATGSERSAKSGERGSNARKATPGFKRLFINLGKMDNFFP
NELISLLNNNTRGRVELGRIDLMQKFSFFEVEDKEAGNVIKALNRANWNGRKVSVEIAGE
EGKDAPKGKRRNEGGNYGKKEFDGKKRSYKDERRSEVAGKRSDKTEYAATDKKKNKPSRE
ERGYTKARGKKDDWKQFFQGNNEFKDSEPDFSEEGWAKRTPKKK
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaagacatttgaagagctcggtgtgtcgccggagatacgccgcgccattgaagaaatg
ggatatgcgtgtcccatgccggtacaagaggaagtaatcccttaccttttgggagaaaat
aatgatgtagtagcactggcacaaacaggaacaggaaagaccgcagcgttcggtctgccg
cttatacagcaaatcaacgttaacaaccgaataccccaatcacttattctttgccctacc
cgcgaactctgtttacagatagcgggcgacctgaatgattactccaagtacatcgacggt
ctgcgggtattgcccgtgtacggcggttcgtccatcgaaagccagatacgtgccctgaag
cggggagtacacatcatcgtagctacccccggacgtctgctcgaccttatggaacgcaag
accgtctcactctccaccatccagaacgtggttatggacgaggcggacgaaatgctgaac
atgggttttacggacagcattaatgccattctcgcagatgtgccccaagagcgtaacaca
ctgctgttctccgcgaccatgagtcccgaaatcgcacgtatttccaaaaaatacctgcac
aatgcaaaggaaatcaccatcggacgcagaaatgaaggaaccagcaacgtgaaacacgtg
gtgttcaccgttcatgccaaggataagtacgccgccctgaaacgcatcgtagattactat
ccgcagatatacggcatcatcttctgccgtacccgcaaggaaacccaggaaattgccgac
aaactgatgcaggaaggttacaatgccgactctttgcacggtgaactgagccaggcgcag
cgcgatgccgtcatgcagaaattccgcatacgcaacctgcaactgctggtggctaccgac
gttgccgcacgcggtctggacgtcgacgacctcacccacgtcatcaactacggcctgccc
gatgatacagaaagctacacacaccgcagcggacgtacgggacgtgccggaaaaacaggc
acatccatcgccatcatcaacctgcgcgaaaaaggcaaaatgcgtgaaatcgaacgcatc
atcggtaaaaaattcattcagggagaaatgcctaccggcaagcaaatctgcgagaagcag
ttgctgaaggttattgacgaactcgaaaaagtaaaagtaaatgaggatgaaatccgtgat
ttcatgcccgacatttaccgcaagctggactggttgagtaaggaagacctgattaaacgc
atggtttccctcgaattcaaccgcttcctggactactatcgcgaccgtgaggaaatagaa
attgccaccggcagcgaacgcagcgccaaaagcggcgaacgcggcagcaatgcccgcaag
gcaactccgggctttaaacgtctgtttatcaatctcggtaaaatggacaacttcttcccc
aacgaactgatcagcctcctgaacaacaatacccgcgggcgtgttgaattaggccgtatc
gacctgatgcagaagttctctttctttgaagtggaagacaaagaagcgggcaacgttata
aaagccttaaaccgggccaactggaacggccgtaaggtttctgtagagattgcgggagaa
gaagggaaagacgctcccaaaggaaaacgcaggaacgaaggcggcaactacggcaaaaag
gaatttgacggcaaaaaacgcagctacaaggatgagcgtcgcagcgaggttgccggcaaa
cgcagcgataagaccgaatatgccgctaccgacaagaaaaagaacaagcccagtcgcgaa
gaacgcggttataccaaggcacgcggcaaaaaagacgattggaaacagttctttcaaggc
aataacgaatttaaagattcagaaccggacttcagcgaagaaggctgggcaaaacggaca
cctaaaaagaaataa
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