Bacteroides stercoris: K6V31_14190
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Entry
K6V31_14190 CDS
T07883
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bste
Bacteroides stercoris
Pathway
bste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6V31_14190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bste03019
]
K6V31_14190
03400 DNA repair and recombination proteins [BR:
bste03400
]
K6V31_14190
Enzymes [BR:
bste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K6V31_14190
Messenger RNA biogenesis [BR:
bste03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K6V31_14190
DNA repair and recombination proteins [BR:
bste03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K6V31_14190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HTH_9
Motif
Other DBs
NCBI-ProteinID:
UBE40943
LinkDB
All DBs
Position
complement(3361795..3363732)
Genome browser
AA seq
645 aa
AA seq
DB search
MSSQPDASQLSTLNSRILKQYWGYDRFRGIQEDIIDSISKNKDTLGLMPTGGGKSITFQV
PALAKEGMCLVITPLIALMKDQVQNLKKRGIKALAIYSGMSRQDIIITLENCIFGNYKFL
YISPERLDTEIFRTKLRKMHISMITVDESHCISQWGYDFRPAYLKIAEIRELLPDVPVLA
LTATATPEVVKDIQARLHFRHKNVFRMSFERNNLAYIVRKTENKTAELLHILRSMPGSAI
VYVRNRRRTKEITELLNNEHITADFYHAGLDDATKDIRQHRWQSGESRVMVATNAFGMGI
DKPDVRIVIHMDLPDSIEAYFQEAGRAGRDGQKAYAVILYAKSDKTTLHKRIPDTFPEKE
YIRDVYEHLQYYYQMAMGDGLDCVREFNIEDFCRKFKYFPVPVDSALRILTQAGYLEYTA
EQDSTSRILFTIRRDELYRLREMGEDMDRLIQAVLRSYTGVFTDYTYINEDSLAIRTGLT
RRQIYEMLVHLAKLRIVSYIPHKKTPYIIYTRERVEAQRIHISPEVYEHRKARYETRINA
MLDYVTNNTVCRSRMLLDYFGERNEHNCGQCDTCISLRSKSKVSEQPDRETLCAKVCGIL
SRESLTPAGLLKQLPMDKELLTEILHRLSDEGKIIAVDGILQIRK
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgcagcccgacgcctcccaactttcaactctcaactcccgaatcctaaagcag
tattggggatatgaccgttttcggggtatccaggaagatatcatcgacagcattagcaag
aataaggataccttgggactgatgcctacgggtggcggcaagtccattactttccaagtc
ccggcacttgccaaagaaggaatgtgcctggtgattacccccctgatagccctgatgaaa
gaccaggtacagaatttgaaaaagcggggtatcaaggcacttgccatctactccggcatg
agccggcaggacatcatcatcacccttgaaaactgtatattcggcaactataagttcctc
tatatctcacccgaacgtctggatacggaaatattccgcaccaaattgcggaaaatgcac
atcagcatgattacggtagacgaaagccactgcatctcgcaatgggggtatgacttccgt
cccgcctatctgaaaatcgcagagatacgcgaactgctgccggatgtccctgttctggca
ctgaccgccactgcaacccccgaagtggtaaaagatatccaagcccgtctgcatttccgt
cacaagaatgtattccgcatgagtttcgagcggaacaacctcgcttatattgttcgcaaa
acagagaacaagactgccgaactgttgcatatactgcgcagcatgcccggcagtgccatt
gtatacgtacgcaaccgccgccgcaccaaggaaattaccgaactgctgaacaacgagcac
atcacagccgatttctaccatgccggactggacgatgccaccaaagacatccgccagcac
cgctggcaatccggcgagagccgtgtcatggtggcaaccaatgctttcggcatgggcata
gacaaaccggacgtgcgcatcgttatccacatggacctgcccgactccatagaagcctac
ttccaggaagccggaagagccggacgtgacggacagaaggcgtatgccgtcatcctatat
gccaagtcagacaagactacactgcacaaacgcatccccgacacctttccggagaaagaa
tatatcagagacgtttacgaacatctccaatactattatcaaatggcaatgggtgacggg
ctggattgcgtacgcgaattcaacatcgaagatttctgccgtaaattcaagtacttcccc
gtaccggtggacagcgctttgcgaatcctgacccaggcgggctatctggagtatactgcc
gaacaggacagcacctcacgcatcctcttcaccatacgcagggatgaactctaccggctg
cgcgaaatgggcgaagacatggacaggctcatacaagccgtgcttcgttcctataccgga
gtattcacagactatacctatatcaacgaagattcgcttgccatacgcacaggacttacc
cgccggcaaatctacgaaatgctggttcaccttgccaaactgcgcatcgtaagctatatt
ccccataaaaagacaccttatataatatacacgcgcgaacgcgtggaagcacagcgcatc
catatctccccggaagtatacgaacaccggaaagcacgctatgaaacgcgcatcaatgcc
atgctcgattacgtgaccaacaacaccgtatgccgcagccgtatgctgctggactacttc
ggggagagaaacgaacataactgcggacaatgcgacacctgtatcagcctgcgcagcaaa
tcaaaagtttctgaacaaccggaccgggaaacgctttgtgcaaaagtatgcgggatattg
tcccgtgaatccctgactcccgccggcctgctcaaacaacttccaatggacaaagagctt
ctgaccgaaatattgcaccggttatcggacgaaggaaaaattattgccgtcgacggaata
ctgcaaatcagaaaataa
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