Burkholderia stagnalis: WT74_01685
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Entry
WT74_01685 CDS
T04885
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bstg
Burkholderia stagnalis
Pathway
bstg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bstg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WT74_01685 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bstg03021
]
WT74_01685 (rpoB)
03400 DNA repair and recombination proteins [BR:
bstg03400
]
WT74_01685 (rpoB)
Enzymes [BR:
bstg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WT74_01685 (rpoB)
Transcription machinery [BR:
bstg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WT74_01685 (rpoB)
DNA repair and recombination proteins [BR:
bstg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WT74_01685 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
UbiD
Motif
Other DBs
NCBI-ProteinID:
AOK51542
UniProt:
A0A3P0I0U5
LinkDB
All DBs
Position
1:395502..399608
Genome browser
AA seq
1368 aa
AA seq
DB search
MQYSFTEKKRIRKSFAKRPIVHQVPFLLATQLESFSTFLQADVLTAQRKPEGLQAAFTSV
FPIVSHNGFARLEFVSYALSSPAFNIKECQQRGLTYCSALRAKVRLVILDKESPNKPVVK
EVKEQEVYMGEIPLMTPTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSAR
IIPYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKAIGLTPEQILANFFVFDNFTLMDE
GAQLEFVPERLRGEVARFDITDRDGKVIVQKDKRINAKHIRDLEAAKTKFISVPEDYLLG
RVLAKNVVDGDTGEVIASANDEITESVLEKLREAGIKDIQTLYTNDLDQGPYISSTLRVD
ETADKTAARIAIYRMMRPGEPPTEEAVEALFNRLFYSEEAYDLSKVGRMKFNRRVGRDEI
TGPMTLQDDDILATIKILVELRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAHLNEYGFLETPYRKV
VDSKVTDQIDYLSAIEEGRYMIAQANAAIDENGQLIDELVSSREAGETMMVTPDRIQYMD
VAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKPVVGTGIERTCAVDSGT
TVQAFRGGVVDYVDAGRIVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPIVKMG
DKVSRGDVLADGASTDLGELALGQNMLIAFMPWNGYNFEDSILISEKVVADDRYTSIHIE
ELNVVARDTKLGPEEITRDISNLAEVQLGRLDESGIVYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIQRDKRAQQIIDDELK
RYRLDLNDQLRIVEGDAFQRLARMLVGKVANGGPKKLAKGTKIDQAYLEDLDHYHWFDIR
LADDEAAVQLEAIKNSIEEKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKIVPVEDMPYMADGRPADVVLNPLGVPSRMNVGQVLEVHLGWAA
KGLGWRIGEMLQRQAKIEELRVFLTKIYNESGRAEDLESFSDDEILELAKNLREGVPFAT
PVFDGATEDEMAKMLDLAFPDDIAEHLDMNPSKNQVRLYDGRTGEMFERRVTVGYMHYLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVNGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSLGIDIDLDRN
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgcaatattccttcaccgagaagaagcgcattcgcaagagtttcgcgaagcgccccatc
gttcaccaagttcctttcctgctggccacccagcttgaatcattcagcacgtttctgcaa
gctgatgttctgacggcgcaacgcaagcctgagggtttgcaggctgccttcacatcggta
tttcccattgtttcgcacaatggtttcgcgcgtctcgagttcgtgagctacgcgctgtcc
tcgccggcattcaacatcaaggaatgtcagcagcggggcctgacgtactgctccgcgctg
cgcgcgaaggtgcgcctcgtcatcctcgacaaggaatcgccgaacaagccggtcgtcaag
gaagtgaaggagcaggaagtgtacatgggcgaaattccgctcatgacgccgacgggctcg
ttcgtcatcaacggtaccgagcgtgtgatcgtctcgcagctgcaccgctcgccgggcgtg
ttcttcgaacacgacaagggcaagacgcacagctcgggcaagctgctgttctcggcacgg
atcatcccgtaccgcggctcgtggctcgacttcgaattcgatccgaaggacatcctgtac
ttccgcgtcgaccgtcgccgcaagatgccggtcacgatcctgctgaaggcgatcggcctc
acgccggaacagatcctcgcgaacttcttcgtgttcgacaacttcacgctgatggacgaa
ggcgcgcaactcgagttcgtgccggagcgcctgcgtggtgaagtcgcgcgtttcgacatc
acggatcgcgacggcaaggtcatcgtccagaaggacaagcggatcaacgcgaagcacatt
cgcgacctcgaagccgcgaagaccaagttcatctcggtgccggaagactatctgctcggc
cgcgtgctggcgaagaacgtcgtcgacggcgacaccggcgaagtgatcgcgagcgcgaac
gacgagatcacggaaagcgtgctcgagaagctgcgcgaagcgggcatcaaggacatccag
acgctctacacgaacgacctggaccagggcccgtacatctcgtcgacgctgcgtgtcgac
gaaacggccgacaagacggccgcgcgcatcgcgatctaccgcatgatgcgtccgggcgag
ccgccgaccgaagaagcggtcgaggcgctgttcaaccgcctgttctacagcgaagaagcg
tacgacctgtcgaaggtcggccgcatgaagttcaaccgccgcgtcggccgtgacgagatc
accggcccgatgacgctgcaggacgacgacatcctcgcgacgatcaagatcctcgtcgag
ctgcgcaacggcaagggcgaagtggacgacatcgaccacctcggcaaccgtcgcgtgcgt
tgtgtcggcgaactggcggaaaaccagttccgcgcaggcctcgtgcgtgtcgagcgcgca
gtcaaggaacgcctcggccaggccgaaagcgaaaacctgatgccgcacgacctgatcaac
tcgaagccgatttcgtcggcgatccgcgagttcttcggttcgtcgcagctgtcgcagttc
atggaccagaccaacccgctgtcggaaatcacgcacaagcgccgtgtttccgcactgggc
ccgggcggtctgacgcgcgagcgcgcaggcttcgaagtccgcgacgtgcacccgacccac
tacggccgcgtgtgcccgatcgaaacgccggaaggtccgaacatcggcctgatcaactcg
ctcgcactgtacgcgcacctgaacgaatacggcttcctcgagacgccgtaccgcaaggtc
gtcgacagcaaggtgaccgaccagatcgactacctgtcggcgatcgaggaaggccgctat
atgatcgcgcaggcaaacgccgcgatcgacgagaacggccagctgatcgacgaactcgtg
tcgtcgcgtgaagccggcgaaacgatgatggtcacgccggaccgcatccagtacatggac
gtggcgccgtcgcagatcgtgtcggttgcagcctcgctgattccgttcctcgagcacgac
gatgcgaaccgtgcactgatgggttcgaacatgcagcgtcaggccgtgccgtgtctgcgt
ccggagaagccggtcgtcggtacgggcatcgagcgcacctgcgcggtcgactcgggcacg
acggtccaggcgttccgcggcggcgtcgtcgactatgtcgacgcaggccgtatcgtgatt
cgcgtgaacgacgacgaagcggtcgcgggtgaagtcggtgtcgacatctacaacctgatc
aagtacacgcgttcgaaccagaacacgaacatcaaccagcgtccgatcgtgaagatgggc
gacaaggtctcgcgcggcgacgtgctggccgacggcgcctcgacggacctgggcgagctc
gcgctcggccagaacatgctgatcgcgttcatgccgtggaacggctacaacttcgaggat
tcgatcctgatctcggagaaggtcgtggccgacgatcgctacacgtcgatccacatcgaa
gagctgaacgtcgttgcacgcgacacgaagctcgggccggaagaaatcacgcgcgacatc
tcgaacctggcggaagtccagctcggccgtctcgacgaatcgggcatcgtgtacatcggt
gcggaagtcgaagcgggcgatgtgctggtcggcaaggtcacgccgaagggcgagacccag
ctgacgccggaagagaagctgctgcgcgcgatcttcggcgagaaggcgtcggacgtgaag
gacacgtcgctgcgcgtgccgtcgggcatgagcggcaccgtgatcgacgtccaggtgttc
acgcgtgaaggcatccagcgcgacaagcgtgcgcaacagatcatcgacgacgaactgaag
cgctaccgtctcgacctgaacgaccagctgcgcatcgtggaaggcgacgcgttccagcgt
ctcgcgcgcatgctcgtgggcaaggttgcaaacggcggcccgaagaagctcgcgaagggc
acgaagatcgaccaggcttacctggaagacctcgaccactatcactggttcgacatccgc
cttgcggacgacgaagcagcggtgcagctcgaagcgatcaagaactcgatcgaagagaag
cgccaccagttcgacctcgcgttcgaagagaagcgcaagaagctcacgcaaggcgacgaa
ctgccgccgggcgtgctgaagatggtcaaggtgtacctcgcggtgaagcgccgcctgcag
cctggcgacaagatggcaggccgccacggtaacaagggtgtcgtgtcgaagatcgttccg
gtcgaagacatgccgtacatggctgacggccgtccggccgacgtcgtgctgaacccgctc
ggcgtgccgtcgcggatgaacgtgggtcaggttctggaagtgcacctcggctgggccgcg
aagggcctcggctggcgtatcggcgaaatgctgcagcgtcaggcgaagatcgaggagctg
cgtgtcttcctgacgaagatctacaacgagtcgggccgcgcggaagatctggagagcttc
agcgacgacgagatcctcgagctcgcgaagaacctgcgcgaaggcgtgccgttcgcgacg
ccggtgttcgatggcgcgaccgaggacgaaatggcgaagatgctcgacctcgcgttcccg
gacgacatcgccgaacacctcgacatgaacccgtcgaagaaccaggtccgtctgtacgac
ggccgcacgggcgaaatgttcgagcgtcgcgtgacggtcggctacatgcactacctgaag
ctgcaccacttggtcgacgacaagatgcacgcgcgttcgacgggcccgtactcgctcgtc
acgcagcagccgctgggtggtaaggcgcagttcggtggccagcgtttcggtgaaatggaa
gtgtgggcactcgaggcatacggcgcgtcctacgtgctgcaggaaatgctgacggtgaag
tcggacgacgtgaacggccggaccaaggtgtacgagaacctggtcaagggcgatcacgtg
atcgacgccggcatgccggaatccttcaacgtgctcgtgaaggaaatccgctcgctcggt
atcgacatcgatctcgaccgcaattaa
DBGET
integrated database retrieval system
