Burkholderia stagnalis: WT74_03000
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Entry
WT74_03000 CDS
T04885
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bstg
Burkholderia stagnalis
Brite
KEGG Orthology (KO) [BR:
bstg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bstg03016
]
WT74_03000
Enzymes [BR:
bstg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
WT74_03000
Transfer RNA biogenesis [BR:
bstg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
WT74_03000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AOK51778
LinkDB
All DBs
Position
1:674496..676586
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AA seq
696 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFEKPAASELMQEADAA
AQQIDLDFLWECAPAEEFAYTALADEYFGTTYGPVERAALVLRLHGSPVYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQAQYEEELKAGKLPEAFDGKVLALLTRPDKNAIEYKA
LEAAAGARGVSPARLMLDCGGIASARALHEARFLAEFFPHGTGFPPVSVGALPDDLPRAD
VSAFSIDDVTTTEIDDAFSVEHLSDGRVRIGVHIAAPALGIARGDAVDAIARTRLSTVYM
PGDKITMLPDDVVDVFTLKEGDYRPALSLYIIVNRETQEIVANETRAELVFVKNNLRHNT
LDELVTEETLADGSGDYPHKDDIAVLWPLAQALFEKRQLARAGYGLKREVQRNTDYNFYV
DGERVTITPRRRGSPLDLIVSELAILANSTWGAFLHDHTVPGIYRSQRGFGAPGPKRTRM
QTTAAPHEGLGVPQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLYAV
VQGFDDTYSAYADYQRRMEYFWCLRWLQQEGKKQVVASVVKGDLVRLEDVPLLLHVPALG
VHARGTRVLLDVMSIDELTIEASVRLLNVLDAPVVSGGEAGEEEEDGEGGDDVLLDAGDA
SAEAEAEALAEAGADAGAGGSDGAAENNGNEEERAS
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgacgcgtttcaggtcgagttgcccggcgggcggcgcgccaaggtgcgcgcgaaggac
gtgctgatcgaattcgagaagccggccgcgagcgaactgatgcaggaggccgacgcggcc
gcgcagcagatcgacctggatttcctgtgggaatgcgcgccggcggaggaattcgcatat
acggcgctcgccgacgaatacttcggcacgacctacggcccggtcgagcgcgcggcgctc
gtgctgcgcctgcatggctcgcccgtgtatttccgccgcaaggggcgcggccagtatcag
cgcgcgccggaagagcagctcaagatggcgctcgcgtcgctcgagcgcaagcgccagcag
gcgctcgtgcaggcgcagtacgaagaggagctgaaggccggcaagctgccggaagcgttc
gacggcaaggtgctcgcgctgctcacgcgcccggacaagaacgcgatcgaatacaaggcg
ctcgaggcggcggccggcgcgcgcggcgtgtcgccggcgcggctgatgctcgactgcggc
ggcatcgcgtccgcgcgcgcgctgcacgaggcgcgcttcctcgccgaattcttcccgcac
ggcaccggctttccgccggtcagcgtcggtgcgctgccggacgacctgccgcgcgcggac
gtctcggcgttctcgatcgacgacgtcacgacgaccgaaatcgacgacgcgttctcggtc
gagcacctgagcgacggccgcgtgcggatcggcgtgcacatcgcggcgccggcgctgggc
atcgcgcgcggcgacgcggtcgacgcgatcgcgcgcacgcgcctgtcgaccgtgtacatg
cccggcgacaagatcacgatgctgccggacgacgtcgtcgacgtgttcacgctgaaggag
ggcgactatcgcccggcgctgtcgctgtacatcatcgtgaaccgcgaaactcaggagatc
gtcgcgaacgagacgcgcgccgaactcgtgttcgtgaagaacaacctgcgccacaacacg
ctcgacgagctcgtcaccgaggagacgctcgccgacggcagcggcgactatccgcacaag
gacgacatcgcggtgctgtggccgctcgcgcaggcgctgttcgagaagcgccagctggcg
cgcgcgggctacggcctgaagcgcgaagtgcagcgcaacaccgactacaacttctacgtc
gacggcgaacgcgtgacgatcacgccgcgccggcgcggctcgccgctcgacctgatcgtg
tcggaactcgcgatcctcgcgaactcgacatggggcgcgttcctgcacgaccacacggtg
ccgggcatctatcgctcgcagcgcggcttcggcgcgccgggcccgaagcgcacgcggatg
cagacgacggccgcgccgcacgaaggcctcggcgtgccgcagtacgcgtggagcacgtcg
ccgctgcgccgctacgtcgacctcgtcaaccagtggcagctgctcgcatgcgtgcagcac
ggcgtcaccgcgaagctcgccgcgccgttcaagccgaaggatgccgatctgtacgcggtc
gtgcagggcttcgacgacacctattccgcatacgccgactaccagcgccggatggaatat
ttctggtgcctgcgctggctccagcaggaaggcaagaagcaggtcgtcgcgagcgtcgtg
aagggtgacctcgtgcgtctcgaggacgtgccgctgctgctgcacgtgccggcgctcggc
gtgcatgcgcgcggcacgcgcgtgctgctcgacgtgatgtcgatcgacgagctgacgatc
gaggcatcggtgcggctgctcaacgtgctcgacgcgccggtcgtgtcgggcggcgaagcg
ggcgaggaggaggaagacggcgagggtggcgacgacgtgctgctcgacgcgggcgacgcg
tcggcggaagccgaggccgaggcgctggccgaggctggagccgatgccggcgcaggcggc
agcgacggcgccgcggaaaacaacggcaacgaggaggagcgcgcatcatga
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