Burkholderia stagnalis: WT74_06075
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Entry
WT74_06075 CDS
T04885
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bstg
Burkholderia stagnalis
Pathway
bstg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bstg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WT74_06075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bstg03400
]
WT74_06075
Enzymes [BR:
bstg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
WT74_06075
DNA repair and recombination proteins [BR:
bstg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WT74_06075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AOK52319
LinkDB
All DBs
Position
1:1341125..1344835
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AA seq
1236 aa
AA seq
DB search
MSGASHPQASLELDVFACPLDGVNQIEASAGTGKTWNICALYVRLLLEKDLGADQILVVT
FTKAATAELHERIRGRLAQLAHALDTGDDGGDPFITRLVDTTLGDGGVLDPQTAAKRIRR
ALRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFEMQADDAALRFELAADFWRTRVEPTA
ARWPGFAAWLVESGAGPAALDAQLARRLKKPLAALRWDGVDEPDEAVEAAAAECFAEAAR
IWAAERDAIDALLRAAQPALNQRSHKPEAIADALDAWAAHFAHADATAGLPKAALRLTRA
ALVKATKKGGATPDHPFFDVADALDAAVAAAEAAQRARWLALVAVWLDEAPRALAERKRT
RRVVSFDDLLANLYDALHTHPWLAQTLRARYPAALIDEFQDTDPLQFAIFDRIFAPGGPL
FLVGDPKQAIYSFRAADLHTYLAARARASACYTLAVNQRSTPAVVDACNRFFMSNPRAFV
LDGLDYYPVRAGTRTRAPLADETDTGPAGDFRIWTLPGGDDVWLKRDAQAHAAQACAAEI
ARLMQGARDGRVRLGDTPLSPGDIAVLVQTHKQGSLVKRVLATWGIGSVELAQASVFSTG
DAEQLERVLAAIDAPGDLRRLRAALASDWFGLDAGALWRMEQGDGDARGAAVQDAGGADA
MSWVERFSRYRLLWRERGFAVMWRTFTRELRIAERLMAGADGERRVTDVNHLAELTQARA
SAQPGIAPTLRWLAAQRLDGGGEEAQLRLESDRNLVQIVTVHKSKGLEYAIVFCPFLNDG
ALREPFASALPDAREYHDEAGDAVLHYGCDDAAAEHAARQALREQAAERARLVYVALTRA
VYRCYLVAGPYLSSRSTRESRRSVLNWLVAGGGQSFDAWLDEPPDEAALDHAWRALAGGP
VSVAPLPAPARRERLATGHDASQALAARHASRLLRDAWRIASFSSLTASAAREEAGVAAV
PDDELRPDHDALAELAPDGDQDDTPPALAPPDDDILVFPRGAAAGECLHRLFELSDFTDP
ASWHGAALGALHDRPVEAEPELGQRLPAMMARLVDDVVRTELVPGMRLADLDPAKRLNEM
GFLFPAPSLELAALRRLLIAHGYPDVALEAGVLAGFIKGFIDMIVEHDGRFWIVDWKSNH
LGNTPDAYGPRALDAAMADHAYHLQALLYTVALHRYLRGRLRDYDYDTHIAGYLYLFVRG
VRPGWRSGGEPAGVHARRPARELVDALDLLMDGGRA
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgcatcgcatccgcaggcgtcgctcgagctcgacgtgttcgcgtgcccgctc
gacggcgtcaaccagatcgaggcgtcggcgggcaccggcaagacctggaacatctgcgcg
ctttacgtgcggctgctgctcgagaaggatctcggcgcggaccagattctcgtcgtgacc
ttcacgaaggccgctaccgcggaactgcacgaacgcatccgcggccggctcgcgcagctc
gcccatgcgctcgacaccggcgacgacggcggcgatccgttcatcacgcgcctcgtcgac
acgacgctcggcgacggcggcgtgctcgatccgcagacggccgcgaagcggatccggcgc
gcgctgcgcgcgttcgaccaggcggcgatccacacgatccacgcgttctgccagcgcgcg
ctgcaggaggcgccgttcgccgccgcgatgccgttcgcgttcgagatgcaggccgacgac
gcggcattgcgcttcgaactggcggcggacttctggcgcacccgtgtcgagccgaccgcg
gcgcgctggccgggcttcgccgcgtggctcgtcgaatcgggtgcgggcccggccgcgctc
gacgcacagctcgcgcgccggctgaagaagccgctcgccgcgttgcgctgggatggcgtg
gacgagcccgacgaagcggtggaggcggccgcggccgaatgcttcgcggaggcggcacgg
atctgggcggccgagcgcgacgcgatcgacgcgttgctgcgcgccgcgcagccggcgctc
aaccagcgttcgcacaaaccggaggcgatcgccgatgcgctcgacgcgtgggccgcgcat
ttcgcgcatgccgacgcgacggccgggttgcccaaggccgcgctgcggctcacgcgcgcg
gcgctcgtcaaggcgaccaagaagggcggcgcgacgcccgaccatccgttcttcgacgtc
gcggacgcgctcgacgccgcggtggccgccgccgaggccgcgcagcgcgcgcgctggctc
gcgctcgtcgccgtgtggctcgacgaagcgccgcgcgcgctggccgagcgcaagcgcacg
cggcgcgtcgtgtcgttcgacgatctgctcgcgaacctgtacgacgcgctgcacacgcat
ccatggctcgcgcagacgctgcgcgcacgctatccggccgcgctgatcgacgaattccag
gataccgacccgctgcagttcgcgatcttcgaccggatcttcgcgccgggcgggccgctg
ttcctcgtcggcgatccgaagcaggcgatctacagcttccgcgcggcggatctgcatacg
tacctggcggcgcgcgcgcgggcgagcgcgtgctacacgctcgcggtcaaccagcgctcg
acgccggcggtggtcgatgcgtgcaaccgcttcttcatgtcgaacccgcgcgcgttcgtg
ctcgacggcctcgactactacccggtgcgggccggcacccgtacgcgcgcgccgctcgcc
gacgagacggataccggcccggcgggcgacttccggatctggacgctgccgggcggcgat
gacgtgtggctcaagcgcgatgcgcaggcgcacgccgcgcaggcctgcgcggcggagatc
gcgcggctgatgcagggcgcgcgcgacggtcgcgtgcggctcggcgacacgccgctgtcg
ccgggcgacatcgcggtgctcgtgcagacgcacaagcagggcagcctcgtgaagcgcgtg
ctggcgacctggggcatcggcagcgtcgagctcgcgcaggcgtcggtattctcgaccggc
gatgccgagcagctcgaacgcgtgctggcggcgatcgacgcgccgggcgacctgcggcgc
ctgcgcgcggcgctcgcgtcggactggttcggtctcgacgccggcgcgctgtggcgcatg
gagcagggcgacggcgacgcgcgcggcgcggcggtgcaggacgccggcggcgccgacgcg
atgagctgggtcgagcgcttctcgcgctatcgcctgctatggcgcgaacgcggcttcgcg
gtgatgtggcgcacgttcacgcgcgagctgcggatcgccgagcggctgatggcgggcgcc
gacggcgagcgccgcgtgacggacgtgaaccatctcgccgagctcacgcaggcgcgcgcg
tccgcgcagccgggcatcgcgcccacgctgcgctggctcgccgcgcagcggctcgacggc
ggcggcgaggaggcgcagctgcgtctcgaatccgatcgcaacctcgtgcagatcgtgacc
gtgcacaaatcgaagggcctcgaatacgcgatcgtgttctgcccgttcctgaacgacggc
gcgctgcgcgagccgttcgcgtccgcgctgcccgacgcgcgcgagtatcacgacgaggcg
ggcgacgcggtgctgcactacggctgcgacgacgcggccgccgagcatgcggcgcggcag
gcgctgcgcgagcaggcggcggagcgcgcgcggctcgtctacgtggcgctgacgcgcgcg
gtctatcgctgctacctcgtcgcggggccgtacctgtcgtcgcgctcgacgcgcgaatcg
cggcgcagcgtgctgaactggctcgtggccggcggcggccagtcgttcgacgcgtggctc
gacgagccgcccgacgaggccgcgctcgaccacgcatggcgcgcgctcgcgggcggcccg
gtgagcgtcgcgccgttgccggcgcccgcgcgccgcgagcggctggccaccgggcacgac
gcatcgcaggcgctggcggcgcgccatgcgtcgcgcctgctgcgggacgcgtggcggatc
gcgagcttcagttcgctgaccgcgtcggcggcgcgcgaggaggcgggcgtcgcggccgtg
ccggacgacgaactgcggcccgaccatgacgcgctggccgaactcgcgccggacggcgac
caggacgacacgccgccggcgctcgcgccgcccgacgacgacatcctcgtgtttccgcgc
ggcgcggcggccggcgaatgcctgcaccgcctgttcgaactgagcgatttcaccgacccg
gcgtcgtggcacggggccgcgctcggcgcgctgcacgaccggccggtcgaggcggagccc
gagctgggccagcggcttccggcgatgatggcgcggctcgtcgacgacgtcgtgcgcacg
gagctggtgccgggcatgcggctcgccgatctcgatcccgcgaagcggctgaacgaaatg
ggcttcctgtttccggcgccgtcgctggagcttgccgcgctgcgccggctgctgatcgcg
cacggctatccggacgtcgcactggaggcgggcgtgctcgccggtttcatcaagggtttc
atcgacatgatcgtcgaacatgacggccggttctggatcgtcgactggaagtcgaaccat
ctcggcaatacgccggacgcctacggcccgcgcgcactcgacgcggcgatggccgatcac
gcgtatcacctgcaggcgctgctctacacggtcgcgctgcatcgttacctgcgcggccgg
ctgcgcgactacgactacgacacgcacatcgcgggctacctgtacctgttcgtgcgcggc
gtgcggccgggctggcgcagcggcggcgagccggccggcgtgcatgcgcggcggccggcc
cgcgagctcgtcgacgcgctcgacctgctgatggacggaggccgcgcatga
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