Burkholderia stagnalis: WT74_06080
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Entry
WT74_06080 CDS
T04885
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bstg
Burkholderia stagnalis
Pathway
bstg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bstg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WT74_06080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bstg03400
]
WT74_06080
Enzymes [BR:
bstg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
WT74_06080
DNA repair and recombination proteins [BR:
bstg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WT74_06080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
UvrD-helicase
Helicase_RecD
SLFN-g3_helicase
RecD_N
AAA_22
DEAD
AAA_25
MukB
Flavi_DEAD
CbiA
Motif
Other DBs
NCBI-ProteinID:
AOK52320
LinkDB
All DBs
Position
1:1344832..1347033
Genome browser
AA seq
733 aa
AA seq
DB search
MSTPDDLLEFTGGLVARLPEPADFGIALAEGFARRIGELARRAGAPAAASRWAARAAFAA
SRATAGGHVCVALGALAQRYDEPLADVRAALAASGIAAFGALARGDERPLIVDRHDRLYL
SRYFDYERRLADALVAQACEGAAADALAPDVLRERLARYFGPAAGDVDWQRVAAIVALTG
RVTIVSGGPGTGKTTTVVGVLACLLDVHPDLRVALAAPTGKAAQRMQEALHARAGELPPE
LAARLPNTSYTLHRLLGGGGAAGFRHHRDNPLPYDLIVVDEASMIDVALAAHLLDALAPG
ARLVLLGDKDQLAAVEAGAVFAELSARPSFSAAARARIAEALGIDEAAFVAALPVPDDVA
PAPAAVPAAVEPVRRPVAPAKIDTRQASLFDDEPSVEAAVTIDEPAGDADEAPAWIEADE
LQWLDAVALPPLDAVPLVAATAETVAVAENRPSPAPLADCVVWLERNYRFGLDSPIGRLS
LAIRRGAVQDALDALPASDAAAASFHEDAGDMLATSTIERLAQRFSAYLDALRGALAAPA
PDPLPLFDALNRFRILCATRGGSRGAEHVNALVAAHVRRAAHVPLAVGAHWFTGRPVMVT
RNDYALGLFNGDIGIALPDAQGALRVWFRRADGTARAVSPAALPPHETAFALTVHKSQGS
EFDEAALVLPATFGRVLTRELVYTAVTRARTRVQVIGGRRVLAQAIATRTQRDSGLSARI
DEALARRRAEVSR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcccgacgatctgctcgaattcaccggcggcctcgtcgcgcggctgcccgag
cccgcggatttcggcatcgcgctcgcggaaggtttcgcacgccggatcggcgaactcgca
cgccgcgccggcgcgccggccgcggcgtcgcgctgggcggcgcgggccgcgttcgcggcg
agccgggcgaccgcgggcggccatgtgtgcgtggcgctcggcgcgctcgcgcagcgttac
gacgaaccgctcgccgacgtgcgcgcggcgctcgcggcgagcggcatcgccgcgttcggc
gcgctcgcgcgtggcgacgagcggccgctgatcgtcgaccgtcacgaccgtctctacctc
tcgcgctatttcgactacgagcggcggctcgccgacgcgctggtcgcgcaagcgtgcgaa
ggcgccgccgccgacgcgctggcgcccgacgtgctgcgcgagcgcctcgcacgctacttc
ggcccggcggccggcgatgtcgactggcagcgcgtcgcggcgatcgtcgcgttgacgggc
cgcgtgacgatcgtcagcggcggccccggcaccggcaagacgaccacggtcgtcggcgtg
ctcgcgtgcctgctcgacgtgcatccggacttgcgcgtcgcgctggccgcgccgaccggc
aaggcggcgcagcggatgcaggaagcgctgcacgcacgcgccggtgagctgccgcccgag
ctcgccgcgcggctgccgaacacgtcgtacacgctgcaccgcctgctcggcggcggtggg
gcggcaggcttccgccatcatcgcgacaacccgttgccgtacgacctgatcgtcgtcgac
gaggcatcgatgatcgacgtcgcgctggccgcgcatctgctcgacgcgctcgcgccgggc
gcgcggctcgtgctgctcggcgacaaggaccagctcgcggcggtcgaggcgggcgcggtg
ttcgccgaattgagcgcgcggccgtcgttcagcgcggcggcccgcgcgcgcatcgccgag
gcgctcggcatcgacgaagcggccttcgtcgcggcgctgccggtgccggacgacgtcgcg
ccggcaccggctgccgtacctgccgcggtcgagcccgtgcgccgccccgtcgcaccggcg
aagatcgacacccggcaggcgtcgctgttcgacgacgaaccgtcggtggaagcggccgtc
acgatcgatgagccggccggcgacgcggacgaagcgcccgcgtggatcgaggccgacgag
ctgcagtggctcgacgcggtggcgctgccgccgctcgatgccgtgccgcttgtcgccgcg
acagccgagacggttgccgtagccgagaaccgcccgtcgcccgcgccgctcgcggactgc
gtcgtatggctcgagcgcaattaccgcttcgggctcgactcgccgatcggccgcctgtcg
ctggcgattcgccgcggcgcggtgcaggacgcgctcgacgcgctgccggcgagcgacgcg
gccgccgcgtcgttccacgaagatgccggcgacatgcttgccacgtcgaccatcgagcgc
ctcgcgcagcgtttctcggcctacctggatgcattgcgcggcgcgctcgcggcccccgcg
ccggacccgttgccgctgttcgatgcgctcaaccggttccggatcctgtgcgcgacgcgc
ggcgggtcgcgcggcgccgagcacgtcaatgcgctcgtcgcggcgcacgtgcgtcgtgcc
gcgcacgtgccgctcgcggtcggcgcgcactggttcaccgggcggcccgtgatggtgacg
cgcaacgattacgcgctcgggctgttcaacggcgacatcggcatcgcgctgcccgacgcg
cagggggcgctgcgcgtgtggttcaggcgcgcggacggcacggcgcgcgcggtgtcgccg
gcggcgctgccgccgcacgagacggcgttcgcgctgaccgtccacaagtcgcagggctcg
gagttcgacgaggccgcgctcgtgctgccggcgacgttcggccgtgtgctgacgcgcgag
ctggtctacaccgcggtgacgcgggcgcgtacgcgcgtgcaggtgatcgggggccgccgc
gtgctcgcgcaggcgatcgcgacgcgcacgcagcgcgattcgggcctgtcggcgcgcatc
gacgaggcgctcgcgcggcgccgtgcggaggtgtcgcgatga
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