KEGG   Burkholderia stagnalis: WT74_06950
Entry
WT74_06950        CDS       T04885                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bstg  Burkholderia stagnalis
Pathway
bstg02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bstg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    WT74_06950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bstg03021]
    WT74_06950
Transcription machinery [BR:bstg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     WT74_06950
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF Sigma70_r4 HTH_23 HTH_24 HTH_IclR PhyR_sigma-like TnsD GerE HTH_7 HTH_11 Xre-like-HTH HTH_3 HTH_29 HTH_28 LacI Trp_repressor HTH_40
Other DBs
NCBI-ProteinID: AOK52467
LinkDB
Position
1:1559848..1560357
AA seq 169 aa
MSADKLPLYREIDALYVGHHAWLRGWLNRKLGCAHRAADLAHDTFMRLLARDEPIGAAEP
RAFLTTVAQRVLYNHWRREQLERAYLDALALRPDAYAPSPEERAVVLETLLEIDRLLDGL
PLAAKRAFLLSQLDGLAQAEIAAELGVSLATVKRYLVKAGTQCYFAMAA
NT seq 510 nt   +upstreamnt  +downstreamnt
atgtccgctgacaagctccctctgtaccgcgaaatcgacgccctgtacgtcggccatcac
gcgtggctgcgtggttggctgaacaggaagctgggttgcgcgcaccgcgcggccgatctc
gcgcacgacacgttcatgcggctgctggcgcgcgacgagccgatcggcgccgccgagccg
cgcgcgttcctgacgacggtcgcgcagcgcgtgctgtacaaccactggcgccgcgagcag
ctcgagcgcgcttatctcgacgcgctcgcgctgcgccccgacgcgtatgcgccgtcgccg
gaggagcgcgcggtcgtgctcgagacgctcctcgagatcgaccggctgctcgacggcctg
ccgctcgccgcgaagcgcgcattcctgctgtcgcaactcgacgggctcgcgcaggccgag
atcgcggccgaactcggcgtgtcgctcgcgacggtcaagcgctacctggtgaaggccggc
acgcagtgctatttcgcgatggcggcctga

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