Burkholderia stagnalis: WT74_06950
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Entry
WT74_06950 CDS
T04885
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bstg
Burkholderia stagnalis
Pathway
bstg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bstg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
WT74_06950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bstg03021
]
WT74_06950
Transcription machinery [BR:
bstg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WT74_06950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_24
HTH_IclR
PhyR_sigma-like
TnsD
GerE
HTH_7
HTH_11
Xre-like-HTH
HTH_3
HTH_29
HTH_28
LacI
Trp_repressor
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AOK52467
LinkDB
All DBs
Position
1:1559848..1560357
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AA seq
169 aa
AA seq
DB search
MSADKLPLYREIDALYVGHHAWLRGWLNRKLGCAHRAADLAHDTFMRLLARDEPIGAAEP
RAFLTTVAQRVLYNHWRREQLERAYLDALALRPDAYAPSPEERAVVLETLLEIDRLLDGL
PLAAKRAFLLSQLDGLAQAEIAAELGVSLATVKRYLVKAGTQCYFAMAA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgacaagctccctctgtaccgcgaaatcgacgccctgtacgtcggccatcac
gcgtggctgcgtggttggctgaacaggaagctgggttgcgcgcaccgcgcggccgatctc
gcgcacgacacgttcatgcggctgctggcgcgcgacgagccgatcggcgccgccgagccg
cgcgcgttcctgacgacggtcgcgcagcgcgtgctgtacaaccactggcgccgcgagcag
ctcgagcgcgcttatctcgacgcgctcgcgctgcgccccgacgcgtatgcgccgtcgccg
gaggagcgcgcggtcgtgctcgagacgctcctcgagatcgaccggctgctcgacggcctg
ccgctcgccgcgaagcgcgcattcctgctgtcgcaactcgacgggctcgcgcaggccgag
atcgcggccgaactcggcgtgtcgctcgcgacggtcaagcgctacctggtgaaggccggc
acgcagtgctatttcgcgatggcggcctga
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integrated database retrieval system