Burkholderia stagnalis: WT74_09485
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Entry
WT74_09485 CDS
T04885
Name
(GenBank) RNA-binding protein hfq
KO
K03666
host factor-I protein
Organism
bstg
Burkholderia stagnalis
Pathway
bstg02024
Quorum sensing
bstg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bstg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WT74_09485
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WT74_09485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bstg03019
]
WT74_09485
03036 Chromosome and associated proteins [BR:
bstg03036
]
WT74_09485
Messenger RNA biogenesis [BR:
bstg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
WT74_09485
Chromosome and associated proteins [BR:
bstg03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
WT74_09485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AOK54391
UniProt:
A0A119MR02
LinkDB
All DBs
Position
1:complement(2164096..2164335)
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AA seq
79 aa
AA seq
DB search
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARPVNFHPDAEASS
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaaagggcaattgttacaagacccgtttttgaacgcactgcgcaaggagcac
gttccggtttcgatttatctcgtgaacggcatcaagctccaagggaacatcgaatcgttc
gaccagtacgtcgtgttgctccgtaatacggtgacccagatggtctacaagcacgccatc
tcgacggtcgtgccggcgcgcccggtgaatttccacccggacgcggaagcctcgtcctaa
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