KEGG   Burkholderia stagnalis: WT74_09485
Entry
WT74_09485        CDS       T04885                                 
Name
(GenBank) RNA-binding protein hfq
  KO
K03666  host factor-I protein
Organism
bstg  Burkholderia stagnalis
Pathway
bstg02024  Quorum sensing
bstg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bstg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WT74_09485
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    WT74_09485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bstg03019]
    WT74_09485
   03036 Chromosome and associated proteins [BR:bstg03036]
    WT74_09485
Messenger RNA biogenesis [BR:bstg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     WT74_09485
Chromosome and associated proteins [BR:bstg03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    WT74_09485
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AOK54391
UniProt: A0A119MR02
LinkDB
Position
1:complement(2164096..2164335)
AA seq 79 aa
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARPVNFHPDAEASS
NT seq 240 nt   +upstreamnt  +downstreamnt
atgagcaacaaagggcaattgttacaagacccgtttttgaacgcactgcgcaaggagcac
gttccggtttcgatttatctcgtgaacggcatcaagctccaagggaacatcgaatcgttc
gaccagtacgtcgtgttgctccgtaatacggtgacccagatggtctacaagcacgccatc
tcgacggtcgtgccggcgcgcccggtgaatttccacccggacgcggaagcctcgtcctaa

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