Burkholderia stagnalis: WT74_12235
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Entry
WT74_12235 CDS
T04885
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bstg
Burkholderia stagnalis
Pathway
bstg03030
DNA replication
bstg03430
Mismatch repair
bstg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bstg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WT74_12235 (dnaE)
03430 Mismatch repair
WT74_12235 (dnaE)
03440 Homologous recombination
WT74_12235 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bstg03032
]
WT74_12235 (dnaE)
03400 DNA repair and recombination proteins [BR:
bstg03400
]
WT74_12235 (dnaE)
Enzymes [BR:
bstg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WT74_12235 (dnaE)
DNA replication proteins [BR:
bstg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WT74_12235 (dnaE)
DNA repair and recombination proteins [BR:
bstg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WT74_12235 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
AOK53392
LinkDB
All DBs
Position
1:complement(2756210..2759737)
Genome browser
AA seq
1175 aa
AA seq
DB search
MSDPRFVHLRVHSEFSIADGIVRLDDVVKAAAADGQGALALTDLGNAFGLVRFYQEARGK
GIKPIAGCDVWIANPDDRDKPSRLLLLVKDKRGYLNLCELLSKAWLTNQYRGRAELDASW
LDGELSQGLLALSGAQQGDIGLALAAGNEEAARRHAARWAKVFPGGFYIELQRYGQPGAE
AYIQQAATLAAALKLPVVATHPTQFMTDDDFTAHEARVCISEGDILANPRRQKRFTTDQY
FRTQDDMVALFADLPSAVANTVEIAKRCNLTLELGKPKLPLFPTPDGMSLDDYLIQLSKE
GLEKRLEQLYPDAAERDAQRGTYYQRLEFECGTITKMGFPGYFLIVADFINWAKNNGVPV
GPGRGSGAGSLVAYALGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYV
KEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGVAKLIPFKPGKHVTIADAMK
EEPQLQERYDHEDEVHQLLDLAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGDDGG
VVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKADWSLAQVPLDDPTSFQ
ILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVSLYRPGPMDLIPSFCARKHGREK
VEYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAKHRE
IFAEGAAKNGLSREKSDEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEFMAA
NMTLAMDDTDKVKILFDDCVVNNLVVLPPDINQSHYRFEPVAEADGKRSRTIRYGLGAVK
GSGQNAIEEILRAREEKPFTDLFDFCERIDRRMVNRRTIEALIRAGAFDSLTANRAQLLA
SVPLAMEAADQAEANAMQAGLFDMGAESPHALVDEPAWDDKRRLQEEKGALGFYLSGHLF
DAYRDEVRRFARQKVGELKEGRDKLVAGVIASLRTQMTQRGKMLIALLDDGTGQCEITIF
NEQFEANKALFKEDELLIVQGQARNDAFTGGIRFTADTVMDLERARSRYAQAVRLTMNGN
ADAAVLRRVLEPHVSKDDPAAASAADAPAPRGGGRDGGRRPAPPLPNGLAVQIHYSNARA
QGEMRLGDAWRVKPSDTLLAELRAAFASSAVEIVY
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatccccgcttcgtccatcttcgcgttcactccgaattctcgattgccgacggc
atcgtgcgcctcgacgacgtcgtcaaggccgcggccgcggacggtcagggcgcgctcgcc
ctgaccgatctcggcaacgcattcggtctcgtccgtttctaccaggaagcccgcggcaag
ggcatcaagccgatcgccggctgcgacgtctggatcgccaatccggacgatcgcgacaag
ccgtcgcggctgctgctgctcgtcaaggacaagcgcggctacctgaatctctgcgagctg
ctgtcgaaggcgtggctcacgaaccagtatcgcggccgcgcggagctcgacgcgagctgg
ctcgacggcgagctttcgcagggcctgctcgcgctgtcgggcgcgcagcagggcgacatc
ggcctcgcgctcgcggccggcaacgaggaagcggcgcgccggcacgcggcgcgctgggcg
aaggtgttcccgggcggcttctacatcgaactgcagcgctacggccagccgggcgccgag
gcgtatatccagcaggcggcgacgcttgccgcggcgctgaagctgccggtcgtcgcgacg
catccgacgcagttcatgaccgacgacgatttcaccgcgcacgaggcgcgcgtgtgcatc
tcggagggcgacatcctcgcgaacccgcggcgccagaagcgcttcacgaccgaccagtat
ttccgcacgcaggacgacatggtcgcgctgttcgcggatctgccttccgcggtcgcgaac
acggtcgagatcgcgaagcgctgcaacctgaccctcgagctcggcaagccgaagctgccg
ctgttcccgacgccggacggcatgtcgctcgacgactacctgatccagctgtcgaaggaa
ggcctcgaaaagcgcctcgagcagctctatccggacgccgccgagcgcgatgcacagcgc
ggcacgtactaccagcggctcgaattcgagtgcgggaccatcacgaagatgggctttccg
ggctacttcctgatcgtcgcggacttcatcaactgggcgaagaacaacggcgtgccggtc
ggccccgggcggggttcgggcgccgggtcgctcgtcgcgtacgcgctcggcatcaccgat
ctcgacccgctgcgctacaacctgctgttcgagcgcttcctgaacccggagcgggtgtcg
atgcccgacttcgacatcgacttctgccagcacggccgcgatcgcgtgatccagtacgtg
aaggagaagtacggcgcggatgccgtgtcgcagatcgccaccttcggcacgatggccgcg
aaggcggccgtgcgcgacatcggccgcgtgctcgacctcggctacatgttcaccgacggc
gtcgcgaagctgatcccgttcaagccgggcaagcacgtgacgatcgccgacgcgatgaag
gaggagccgcagctccaggagcgctacgaccacgaggacgaggttcatcagctgctcgac
ctcgcgcagcgcgtcgaaggcctcacgcgcaacgtcgggatgcacgcgggcggcgtgctg
atcgcgcccggcaagctgaccgatttctgcccgctctacacgcagggcgacgacggcggc
gtggtcagccagtacgacaaggacgatgtcgaagcggtcggcctcgtgaagttcgacttt
ctgggcctcaccacgctgacgattctcgactgggccgagcgctacatccgccgcctcgat
ccgtcgaaggccgactggtcgctcgcgcaggtgccgctcgacgatcccacgtcgttccag
atcctcaagaaggccaacacggtcgccgtgttccagctggaaagccgcggcatgcagggc
atgctgaaggatgcgcagcccgaccgcttcgaggacatcatcgcgctcgtgtcgttgtat
cgtccgggcccgatggacctgatcccgagcttctgcgcgcgcaagcacggccgcgagaag
gtcgagtaccccgatccgcgcgtcgaacccgtcctgaaagagacctacggcatcatggtc
tatcaggagcaggtgatgcagatggcgcagatcatcggcggctactcgctcggcggcgcg
gacttgctgcgccgcgcgatgggcaagaagaagcccgaggagatggccaagcaccgcgag
atcttcgccgagggcgcggcgaagaacggcctgtcgcgcgagaagtccgacgagatcttc
gacctgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggccgcctatgcg
ctgctcgcgtactacaccgcgtggctgaaggcgcaccatcccgccgaattcatggcggcc
aacatgacgctcgcgatggacgacaccgacaaggtgaagatcctgttcgacgactgcgtc
gtgaacaacctcgtcgtgctgccgccggacatcaaccagtcgcactatcgcttcgagccg
gtcgccgaagcggacggcaagcgttcgcgcacgatccgctacgggctcggcgcggtgaag
ggcagcggccagaacgcgatcgaggaaatcctgcgcgcgcgcgaggagaagccgttcacc
gacctgttcgacttctgcgagcggatcgaccggcggatggtgaaccgccgcacgatcgag
gcgctgatccgcgccggcgcgttcgattcgctgaccgcgaaccgcgcgcagctgctcgcg
tcggtgccgctcgcgatggaagcggccgaccaggccgaggcgaacgcgatgcaggccggc
ctgttcgacatgggcgccgagtcgccgcatgcgctcgtcgacgagccggcgtgggatgac
aagcgccgtctgcaggaagagaagggcgcgctcggcttctacctgtcgggccacctgttc
gacgcgtatcgcgacgaggtgcgccgcttcgcgcggcagaaggtcggcgaactgaaggaa
gggcgcgacaagctcgtcgccggcgtgatcgcgtcgctgcgcacgcagatgacccagcgc
ggcaagatgctgatcgcgctgctcgacgatggcacgggccagtgcgaaatcacgatcttc
aacgagcagttcgaggccaacaaggcgttgttcaaggaagacgagctgctgatcgtgcag
gggcaggcgcgcaacgatgcgttcacgggcgggatccgcttcacggccgataccgtgatg
gacctcgagcgcgcgcgcagccgctatgcgcaggccgtgcggctgacgatgaacggcaat
gccgatgctgccgtgttgcggcgggtgctcgagccgcacgtgtcgaaggatgatccggcc
gcggcgagcgcggccgatgcccccgcgccgcgcggcggcgggcgtgacggcggccgccgg
cccgcgccgccgctgccgaacggcctcgcggtccagatccactacagcaatgcgcgcgcg
caaggcgagatgcgcctcggcgatgcgtggcgcgtgaagccgagcgataccctgcttgcc
gaactgcgtgccgcgttcgccagcagtgcggtcgaaatcgtttactga
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