Burkholderia stagnalis: WT74_14185
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Entry
WT74_14185 CDS
T04885
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bstg
Burkholderia stagnalis
Pathway
bstg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bstg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WT74_14185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bstg03019
]
WT74_14185
Enzymes [BR:
bstg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
WT74_14185
Messenger RNA biogenesis [BR:
bstg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WT74_14185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
SNF2-rel_dom
HI1480
P-loop_SecA
DegT_DnrJ_EryC1
Cas3-like_C_2
Ric8
Sacchrp_dh_NADP
MerR-DNA-bind
CMS1
ERCC3_RAD25_C
CARD_2
Motif
Other DBs
NCBI-ProteinID:
AOK53754
UniProt:
A0ABX9YUX4
LinkDB
All DBs
Position
1:3169395..3170858
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AA seq
487 aa
AA seq
DB search
MSFESLGLAEPLVKAVNELGYTSPTPIQSQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL
QRLHTFYAEHHNAKRAVRALILTPTRELAAQVEESVRAYSKYLKLRSTVMFGGVSINPQI
DALRRGVDIVVATPGRLLDHMQQKTIDLSNLDILVLDEADRMLDMGFIHDIKRVLAKLPP
RRQNLLFSATFSDEIKALADSLLDSPALIEVARRNTTAESVAQKIHPVDRDRKRELLTHL
IREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALSEFKNNTLQVL
VATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGATGEAVSLVCVDEKQLLRD
IERLIKREIPQEVIAGFEPDPNAKPEPIQQRRGQQPRGGNGGNGGGGGGNRAPRGGASGQ
PAAKRDGAAQPKAATAKASKPRNSGNSGNGGNSGRPGNGGGNAARPASGNAAHANRNRSS
RSGQRGH
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgaatccctcggcctggccgaaccgctcgtcaaggcggtcaatgagctgggc
tatacgtcccccaccccgatccagtcgcaggcgatccccgccgtgctcggcggcggcgac
ctgctcgccggcgcgcaaaccggcaccggcaagaccgccggcttcacgctgccgatcctg
cagcgcctgcacaccttctacgcggaacaccacaacgcgaagcgcgcggtgcgcgcgctg
atcctcacgccgacgcgcgaactcgccgcccaggtcgaggaaagcgtgcgggcgtacagc
aagtacctgaagctgcgctcgaccgtgatgttcggcggcgtcagcatcaatccgcagatc
gatgcgctccggcgcggcgtcgacatcgtcgtcgcgacgccgggccgcctgctcgatcac
atgcagcagaagacgatcgacctgtcgaatctcgacatcctcgtgctcgacgaagccgac
cggatgctcgacatgggcttcatccacgacatcaagcgcgtgctcgcgaagctgccgccg
cgccgccagaacctgctgttctccgcgaccttctccgacgagatcaaggcgctcgccgac
agcctgctcgattcgccggcgctgatcgaggtcgcgcgccgcaacacgaccgccgaatcc
gtcgcgcagaagatccacccggtcgaccgcgatcgcaagcgcgagctgctcacgcacctg
atccgcgaacacaactggttccaggtgctggtcttcacgcgcaccaagcacggcgcgaac
cggctcgcggagcagttgaccaaggacggcatcagcgcgatggcgatccacggcaacaag
agccagtcggcgcgcacgcgtgcgctgtcggagttcaagaacaacacgctgcaggtgctc
gtcgcgaccgacatcgccgcgcgcggcatcgacatcgaccagctgccgcacgtcgtcaac
ttcgacctgccgaacgtgccggaagactacgtgcaccggatcggccgcaccggccgcgcg
ggcgcgacgggcgaagcggtgtcgctggtgtgcgtcgacgagaagcagttgctgcgcgac
atcgagcggctgatcaagcgcgagattccgcaggaagtgatcgcgggcttcgagcccgat
ccgaacgcgaagccggagccgatccagcagcgccgcggccagcagccgcgcggcggtaat
ggtggcaatggcggcggcggtggcggcaatcgcgcgccgcgcggcggcgcgtcaggccag
ccggccgcgaaacgcgacggcgccgcgcaaccgaaggccgccacggcgaaggcctcgaag
ccgcgcaattccggcaattcgggcaacggcggcaacagcggccgcccgggcaacggcggc
ggcaatgcggcccgccccgccagcggcaacgccgcgcacgcgaaccgcaaccgttcgtcg
cgcagcggccagcgcggtcactga
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