Burkholderia stagnalis: WT74_14830
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Entry
WT74_14830 CDS
T04885
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bstg
Burkholderia stagnalis
Pathway
bstg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bstg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WT74_14830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bstg03400
]
WT74_14830
Enzymes [BR:
bstg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
WT74_14830
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
WT74_14830
DNA repair and recombination proteins [BR:
bstg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WT74_14830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
Auto_anti-p27
RNHCP
Motif
Other DBs
NCBI-ProteinID:
AOK53870
UniProt:
A0A119XK97
LinkDB
All DBs
Position
1:complement(3311545..3312375)
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AA seq
276 aa
AA seq
DB search
MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLGVERRGKYL
LFEVDAGWFIVHLGMTGTLRVLPTAGTPPAAAKHDHIDWIFDEFVLRFRDPRRFGAVLWH
PREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVAVKQALLAGDIVVGVGNIYAS
ESLFRAGIRPTTAAGKVSLPRYERLADAVRATLADAIERGGSTLRDFVGSNGESGYFQLD
CLVYDRAGQPCRVCGTPIRQIVQGQRSTYYCPTCQR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttgccagaagtcgaagtcacccgccggggtatcgaaccctttgtcgccggc
cgtcgcgtcgagcgtgtcgacgtgcgcaccgcgatgctgcgctggccggtgccggccggg
ctcgccgagcaattgcgcgcgcgcgaggtgctcggtgtcgagcggcgcggcaagtacctg
ctgttcgaagtcgacgccggctggttcatcgtgcatctcggcatgaccggcacgttgcgc
gtgctgccgacggcaggcacgccgcccgccgcggcgaagcatgaccacatcgactggatc
ttcgacgaattcgtgctgcgctttcgcgatccgcgccgcttcggcgccgtgctgtggcat
ccgcgcgaggccggcgacgtgcatgcgcacccgctgctcgcgagcctcggcgtcgagccg
ttctcgccggcgttcaccggcgcgctgctccatgcgcgcacgcgcgggcgcacggtggcg
gtgaagcaggcgctgctggccggcgacatcgtcgtcggcgtcggcaacatctatgcatcg
gagagcctgttccgcgccggcatccggccgaccaccgccgccggcaaggtatcgctgccg
cgctacgagcggcttgcggatgcggtgcgcgcgacgctcgccgacgcgatcgagcgcggc
ggcagcacgctgcgcgatttcgtcggcagcaacggcgagagcggttacttccagctcgac
tgcctcgtctatgatcgcgcgggccagccttgccgcgtatgcggcacgccgatccggcag
atcgtgcagggccagcgctcgacctactattgcccgacgtgccagcgttga
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