Burkholderia stabilis: BBJ41_00030
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Entry
BBJ41_00030 CDS
T04946
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bstl
Burkholderia stabilis
Brite
KEGG Orthology (KO) [BR:
bstl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bstl03400
]
BBJ41_00030
Enzymes [BR:
bstl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BBJ41_00030
DNA repair and recombination proteins [BR:
bstl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BBJ41_00030
Prokaryotic type
BBJ41_00030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AOR69299
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All DBs
Position
1:4300..5778
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AA seq
492 aa
AA seq
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MPAKSSVAPAIVWFRDDLRVTDQPALTHAVASGRPLVCVFVDDTGDSAGRPLGGAARWWL
HGSLAGLDAALARHGGRLLLLRGDAQREIERIVQDTGAAAVYWNRRYAQPQRDADAALKA
SLKARGVTVESSNGSLLNEPWEVLTGSGAPYQVFTAYWRAARRDRTVAAPLPEPERIVFH
PWPAAVHERALALDALALLPHTPDWAGGLRDAWPQPDEAGAHERLDAFLTASLAGYADAR
DRPDRPATSRLSPFLRFGNLSPRQVWHAAQAAAHEGGAACAAGVDKFLSELGWREFSYAL
LYHFPSLATDNFRAQFDAMAWRDDPAALRAWQRGLTGYPLVDAGLRELWTTGWMHNRVRM
VVASFLIKHLLIDWRAGEAWFWDTLVDADPANNAASWQWVAGCGADAAPYFRIFNPVTQG
EKFDPDGAYIRRWVPELAGLDTASIHAPWQASPLQLDAAGVRLGIDYPKPLVDHAAARGR
ALDALAALPKRR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgccaagtcgtccgttgctcccgcgatcgtctggttccgtgacgatctgcgcgtg
accgaccagcccgcgctgacgcatgcggtcgcgtcgggccgcccgctcgtgtgcgtgttc
gtcgacgacacgggcgacagcgcagggcgcccattgggcggcgcggcgcgctggtggctg
cacgggtcgctggccgggctcgacgccgcgctcgcgcgtcatggcgggcgcctgctgctg
ttgcgcggcgatgcgcaacgcgagatcgagcgcatcgtgcaggacaccggcgccgcggcc
gtgtactggaaccgccgttacgcgcagccgcagcgcgatgccgacgcggcgctgaaggcg
tcgctcaaggcgcgcggcgtgacggtcgagagcagcaacggcagcctgctgaacgagccg
tgggaggtgctgacgggcagcggtgcgccataccaggtgttcaccgcgtactggcgtgcg
gcgcgccgcgatcgcacggtcgcggcgccgctgccggaacccgaacggatcgtgtttcat
ccgtggccggccgccgtgcacgagcgcgcgctggcgctcgatgcgctcgcgttgctgccg
catacgccggactgggccggcggcttgcgcgatgcttggccgcagcccgacgaagccggc
gcgcacgaacggctcgacgcgttcctgacggcgtcgctcgccggttatgcggacgcgcgc
gaccgccccgaccggcccgcgacgagccggctgtcgccgttcctgcgcttcggcaacctg
tcgccgcgacaggtgtggcacgcggcgcaggccgccgctcacgagggcggcgccgcatgc
gcggcaggcgtcgacaagttcctgagcgagctcggctggcgcgaattcagctacgcgctg
ctgtaccacttcccgtcgcttgcaaccgacaacttccgcgcgcagttcgacgcgatggcg
tggcgcgacgatcccgccgcgctgcgcgcatggcagcgcgggttgaccggttatccgctc
gtcgacgccggcttgcgcgagctgtggacgaccggctggatgcacaaccgcgtacggatg
gtcgtcgcgtcgtttctcatcaagcatctgctgatcgactggcgtgcgggcgaagcgtgg
ttctgggacacgctcgtcgacgccgatcccgcgaacaacgcggcgagctggcaatgggtg
gccggttgcggcgccgatgccgcgccgtatttccgcatcttcaatccggtcacgcagggc
gagaagttcgatccggacggcgcgtacatccggcgctgggtgcccgagctcgcgggcctc
gacactgcgtcgatccacgcgccgtggcaagcgtcgccgctgcagctcgacgcggccggc
gtgcggctcggcatcgactatccgaagccgctcgtcgatcatgcagccgcgcgcggccgc
gcgctcgatgcgctggccgcgttgccgaagcgtcgctga
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