Burkholderia stabilis: BBJ41_06045
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Entry
BBJ41_06045 CDS
T04946
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bstl
Burkholderia stabilis
Pathway
bstl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bstl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BBJ41_06045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bstl03400
]
BBJ41_06045
Enzymes [BR:
bstl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BBJ41_06045
DNA repair and recombination proteins [BR:
bstl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BBJ41_06045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
DUF374
Motif
Other DBs
NCBI-ProteinID:
AOR67143
LinkDB
All DBs
Position
1:complement(1300148..1303855)
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AA seq
1235 aa
AA seq
DB search
MSAVSHQPALELDVFACPLDGVNQIEASAGTGKTWNICALYVRLLLEKDLGADEILVVTF
TKAATAELHERIRGRLAQLAHALDTGDDGGDLFIARLLDTTLGEGGALDPETALKRIRRA
LRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFDMEADDASLRFELAADFWRTRVEPAAA
RWPGFAIWLVESGAGPAALDAQLARRLKKPLAALRWDGVTEPDESAEAAAAECFAEAARM
WAAERDAIDALLRVAQPALNQRSHKPDAVADALDAWAAHFAQGDATAALPKAALKLTRTA
LTKATKKGGATPEHAFFDVADALEAAVAAAEATQRARWLALIAEWLDMAPGELAERKRTR
RVVSFDDLLANLYHALHAHPWLAETLRARYPAALIDEFQDTDPLQFAIFDRIFAPGGPLF
LVGDPKQAIYSFRAADLHTYLAARARASACYTLAVNQRSTPAIVDACNRFFMSNPHAFVL
DGLDYYAVRAGTRVRAPFVDETDPGPAGDFRVWALPGGEGTLLKRDAQAQAAQACAAEIA
RLMRGAREGHVRLGDTPLSPGDIAVLVQTHRQGSLVKRVLATWGIGSVELAQASVFSTGD
AEQLERVLAAIDAPGDLRRLRAALAADWFGLDAGALWRMEQGDGDAQHEASAADSADAMS
WVERFSRYRLLWRERGFAVMWRTFTRELRIAERLMAGADGERRVTDINHLAELTQARASA
QPGIAPTLRWLAAQRLDGGGEEAQLRLESDRNLVQIVTVHKSKGLEYAVVFCPFLNDGGL
REPPASALPDAREYHDEAGDAVLHYGCDDEAAAHAARQALREQAAERARLVYVALTRAVY
RCYVVAGPYLSSRSTREARRSVLNWLVAGAGQSFDAWLDEPPDEAALDTAWHALAGGPVS
VAPLPAPARRERLAAGHDASQTLTARHATRVLRDAWRMASFSSLTASMAREQAGVAAVPD
DELRPDHDALAEVTPDGEFVLADTVAPEPPDDDILVFPRGAAAGECLHRLFELSRFTEPE
SWHQAALGALHDRPVEAEPELATRLPAMMARLVGDVVQTELVPGMRLAGLDPAKRLDEMG
FLFPAPSLDLTALRRLLVAHGYPDVALEAGMLAGFIKGFIDMIVEHDGRFWIVDWKSNHL
GTTPDAYGPRALDVAMADHAYHLQALLYTVALHRYLRGRLPDYDYDTHIAGYLYLFVRGV
RPDWRSGGEPAGVHARRPARALVDALDRMMEGGRA
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgtgtcgcatcaaccggcgctcgaactcgacgtgttcgcgtgcccgctcgac
ggcgtcaaccagatcgaggcgtccgccggcaccggcaagacctggaacatctgcgcgctg
tatgtgcgcctgctgctcgaaaaggatctcggcgcagatgaaatcctcgtcgtgaccttc
acgaaagcggcgacggccgagctgcacgagcggattcgcggtcggctcgcgcagctcgcg
cacgcactcgacacgggcgacgacggcggcgatctgttcatcgcgcgcctgctcgacacg
acgctcggcgaaggcggggcgctcgatcccgagacggccttgaagcggatccggcgcgcg
ctgcgcgcgttcgaccaggccgcgatccacacgatccacgcgttctgtcagcgcgcgctg
caggaagcgccgttcgcggccgcgatgccgttcgcgttcgacatggaagccgacgacgcg
tcgctgcgcttcgaactcgcggcggatttctggcgcacgcgcgtcgaaccggccgccgcg
cgctggccgggcttcgcgatctggctcgtcgaatctggcgccggcccggctgcgctcgat
gcgcagctcgcgcgccggctgaagaagccgctggccgcgctgcgttgggacggcgtgacc
gagcctgacgaatcggccgaggccgcagcggccgaatgcttcgccgaggcggcgcggatg
tgggcggccgagcgcgacgcgatcgatgcgctgctgcgcgtcgcgcagcctgcgctgaac
cagcgctcgcacaagcccgacgcggtggccgacgcgctcgatgcgtgggccgcacatttc
gcgcagggcgatgcgacggccgcgctgccgaaggccgcactgaagctcacgcgcaccgcg
ctgacgaaggccacgaaaaaaggcggcgcgacgcccgaacatgcgtttttcgacgtcgcg
gacgcgctcgaagcggccgtggcggcggccgaggccacgcagcgcgcgcgctggctcgcg
ctgatcgccgaatggctcgacatggcgccgggcgagctggccgagcgcaagcgcacgcgg
cgcgtcgtgtcgttcgacgatctgctcgcgaacctgtaccacgcgctgcatgcgcatccg
tggcttgccgagacgctgcgcgcgcgctatccggccgcgctgatcgacgagttccaggat
accgacccgctgcagttcgcgatcttcgaccggatcttcgcgccgggcggcccgctcttt
ctcgtcggcgatccgaagcaggcgatctacagcttccgcgcggccgatctgcatacctac
ctggcggcgcgcgcgcgggcgagcgcgtgctatacgctcgcggtcaaccagcgctcgacg
cctgcgatcgtcgatgcgtgcaaccgcttcttcatgtcgaatccgcacgcattcgtgctc
gacgggctcgactattacgcggtgcgcgccggcacgcgcgtgcgtgcgccgttcgtcgac
gaaaccgatccgggcccggccggcgacttccgggtctgggcgctgccgggcggcgagggc
acgctgctcaagcgcgacgcgcaagcgcaggccgcgcaggcctgcgcggccgagatcgcg
cggctgatgcgcggcgcgcgcgaagggcatgtgcgactgggcgacacgccgctgtcgccg
ggcgacatcgcggtgctcgtgcagacgcaccggcagggcagtctcgtgaagcgcgtgctc
gcgacgtggggcatcggcagcgtcgaactggcgcaggcatcggtgttctcgaccggcgac
gccgagcagctcgagcgcgtgctggcggcgatcgatgcgccgggcgacttgcggcgcttg
cgtgcggcgctcgcggccgactggttcggtctcgacgccggcgcgctgtggcgcatggag
cagggcgacggcgatgcgcaacacgaagcgtccgcggccgacagcgccgacgcgatgagc
tgggtcgagcgtttctcgcggtatcggctgctgtggcgcgaacgtggattcgcggtgatg
tggcgtaccttcacgcgcgagttgcggatcgccgagcggctgatggccggcgcggacggc
gagcgccgcgtgaccgacatcaaccacctggccgaactgacgcaggcgcgcgcatccgcg
cagccgggtatcgcgccgacgctgcgctggcttgccgcgcaacggctcgacggcggcggc
gaagaagcgcaactgcgtctcgaatccgatcgcaacctcgtgcagatcgtgaccgtgcac
aagtcgaaaggcctcgagtatgcggtcgtgttctgcccgttcctgaacgacggcgggttg
cgcgagccgcccgcgtccgcgttgcccgatgcgcgcgagtatcacgacgaagcaggcgat
gcggtgctgcattacgggtgcgacgacgaagcggccgcgcatgcggcgcggcaggcgttg
cgcgagcaggccgcggaacgcgcgcggctcgtctacgtggcgctcacgcgcgcggtctat
cgctgttatgtcgtcgccgggccgtacctgtcgtcgcgctcgacgcgcgaagcgcggcgc
agcgtgctcaactggctcgtcgccggcgccggccagtcgttcgatgcgtggctcgacgag
ccgcccgacgaagccgcgctcgataccgcatggcatgcgcttgcgggcggccccgtgagc
gtcgcaccgctgccggcgcccgcgcgacgcgaacgcctcgcggccgggcacgacgcatcg
cagacgctcacggcgcgccatgcgacgcgcgtgctgcgcgatgcatggcggatggcgagc
ttcagctcgctgaccgcgtcgatggcgcgcgagcaggcgggcgtcgcggcggtgcccgac
gacgagctgcggcccgatcacgatgcgcttgccgaggtgacgcccgatggcgagttcgtc
ctggccgatacggttgcgcccgagccgccggacgacgacatcctcgtgttcccgcgcggc
gcggcggcgggcgaatgcctgcaccgcctgttcgaactcagccggttcacggagcccgag
tcgtggcaccaggccgcgcttggcgcgttgcacgaccggccggtcgaggccgagcccgag
ctggcgacgcgcctgccggcgatgatggcgcggctcgtcggcgatgtcgtgcaaacggag
ctcgtgccgggcatgcggctcgccggtctcgatcccgcgaagcggctcgacgaaatgggt
ttcctgtttccggcgccgtcgctcgacctgacggcgctgcgccggctgctcgtcgcgcac
ggttatccggacgttgcactcgaggctggcatgctcgccggtttcatcaagggtttcatc
gacatgatcgtcgaacacgacggccgtttctggatcgtcgactggaagtcgaaccatctc
ggcacgacgccggacgcctacggcccgcgcgcgctcgacgtcgcgatggccgatcacgcc
tatcacctgcaggcgctgctctatacggtcgcgctgcatcgctacctgcgggggcggttg
cccgattacgactacgacacgcacatcgcgggctatctgtacctgttcgtgcgcggcgtg
cggcccgactggcgcagcggcggcgagccggccggcgtgcatgcgcggcggcccgcgcgc
gcgctcgtcgacgcgctcgaccggatgatggaagggggccgcgcatga
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