Burkholderia stabilis: BBJ41_06050
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Entry
BBJ41_06050 CDS
T04946
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
bstl
Burkholderia stabilis
Pathway
bstl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bstl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BBJ41_06050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bstl03400
]
BBJ41_06050
Enzymes [BR:
bstl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BBJ41_06050
DNA repair and recombination proteins [BR:
bstl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BBJ41_06050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AOR67144
LinkDB
All DBs
Position
1:complement(1303852..1307190)
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AA seq
1112 aa
AA seq
DB search
MLHLFYSNRHETLADALLEDLAAFPARNAPWAPQQVIVPSAALRRRLELDIAARNGVCAN
VEFTYLAQWLWAQIGRVLTVPARSPFAPDRLVWRCYRLFAQAADGAPWLASPRLAAYLSA
SDDAMRYELAHRVAAVLDHYLTYRPGWLAAWQAGESVLAGDAAPRGISDAARDDERWQAA
LWRALLAELSDSGTPPAHRFLVEARHLDDEAAARADWPESVSIFALPTMPPLHIALLREL
SRWIDVRVYALNPCREFWFDIVTAAHAEALDAAGRLDYQEVGHPLLAEWGRQTQAQLHML
HELTESAASGDASRFVENPAPTWLARVQNAILELQPEADVGGAPAERGIEVHVCHSLARQ
LEVLHDRLLAWFDADASLQPSDVLVAVADLAAAGPLIDAVFGTAGAGGARVPYRITGLPP
SQANPVARVLLDWLALPDRQVGAPELVEWLRVDAVAARYGIDAAALETVQTWLAAAGARR
GLSPRASDDAAVPSPRHTFSDALARLFLGYAMPEGAAPVGAWLPIEAATGSEAELLGRLA
RFTDDLDGFAQRLAESHTPRGWSELFADTLARFFDSGAAFADALAGVRDALDAMLAAMTE
GAPDEALPAAVVRAGLAAALDDPARGGVPWGGVTFSSLTSLRGLPYRVVCLLGMDDGVLP
SLARADEFDLMAVLPKLGDRQRRDDERNLFLDLLLAARDRLMIAYTGRSIRDNAPLPPAA
LVDELLDHLALVTAGPDAAPDAVDAARRAFIVEHPLQPFAAAYFQPGSELVSYDAERATL
ASLLAAEASRDGARELRFFAQPLPAEPVEPVAFSEFERFWRHPARAVLRARLGIVLADAQ
AELLDTEPFALDFAGSDALAERVLPLLIESGDAAVHDHALRIADASPELPGGATGAVWRD
QALGSMTQLASNVRRALADGMERRPFSLVVAPAWPDTEQALFGADDAMLSADAVSTPLEL
HGTLNRLTPAGQIIYRYARASARDYLSAWLAHLVYCAVEPGGPRRTLWFGSGGAFELTPV
AAPLERLAPLAALFRAGRRMPLRFFPRSAWARVSDGEAKAASVWINERVVSEADDPAIAI
AWRGAHASLDEPFGTLAKLVFEPLVEHLKEVA
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgctccatctcttctattcgaaccgtcacgagacgctggccgacgcgctgctcgaggat
ctggccgcgttcccggcccgcaacgccccgtgggcgccgcaacaggtcatcgtgccgagc
gccgcgctgcgccggcgtctcgagctcgacatcgccgcgcgcaacggcgtgtgcgcgaac
gtcgagttcacgtatctcgcgcagtggctgtgggcgcagatcggccgcgtgctgacggtg
cccgcgcgttcgccgttcgcgcccgaccgcctcgtgtggcgctgctaccggctgttcgcg
caggcggccgacggcgcgccgtggctcgcgtcgccgcggcttgccgcatatctgtccgcg
tccgacgatgcgatgcgctacgagctcgcgcaccgcgtcgcggccgtgctcgatcattac
ctgacctatcgccccggatggctggccgcgtggcaggccggcgaatccgtgctcgcgggc
gacgccgcgccgcgcgggatcagcgacgccgcacgcgacgacgagcgctggcaggccgcg
ctgtggcgcgcgctgctcgccgagctgagcgacagcggcacgccgcccgcgcatcgtttt
ctcgtcgaggcgcgccatctcgatgatgaggcggccgcgcgcgcggactggccggaatcg
gtcagcatattcgcgctgccgacgatgccgccgctgcacatcgcgctgctgcgcgaactg
tcgcgctggatcgacgtgcgtgtctatgcgctgaacccgtgccgcgaattctggttcgac
atcgtgacggccgcgcacgccgaggcgctcgatgcggccggccggctcgattaccaggaa
gtcggccatccgctgctcgccgaatggggccggcagacgcaggcgcaactgcacatgctg
cacgagctgaccgaaagcgctgcgtcgggcgacgcgtcgcgtttcgtcgagaatcccgcg
ccgacgtggctcgcgcgcgtacagaacgcgatcctcgaactgcagccggaggccgatgtc
ggcggcgcgccggccgagcgcgggatcgaagtgcacgtgtgccatagcctcgcgcgccag
ctcgaagtgctgcacgaccggctgctcgcgtggttcgacgccgatgcgagcctgcagccg
tccgacgtgctcgtcgcggtggccgatctcgcggcggcggggccgctgatcgacgcggtg
ttcggcacggccggcgccggcggcgcacgcgtgccttaccggatcacgggcctgccgccg
tcgcaggcgaacccggtcgcacgcgtgctgctcgactggctcgcgttgccggaccggcag
gtcggcgcgccggagctggtcgaatggctgcgcgtcgacgcggtggccgcgcgctacggc
atcgatgcggccgcgctcgaaacggtgcagacgtggctcgcggccgccggcgcgcggcgc
gggctgtcgccgcgcgcgagcgacgacgcggccgtgccttcgccgcgtcatacgttctcc
gatgcgcttgcgcggctctttctcggttatgcgatgccggaaggcgcggcgccggtcggc
gcatggctgccgatcgaggcggccactggcagcgaggccgagttgctcggccggctcgcg
cgcttcaccgacgatctcgacggctttgcgcagcggctggccgaatcgcatacgccgcgc
ggctggagcgagctgttcgccgacacgctcgcgcgtttcttcgactcgggtgccgcgttc
gcggacgcgctcgcgggcgtgcgcgacgcgctcgacgcgatgctggccgcgatgacggaa
ggggcgcccgacgaagcgctgccggcggccgtcgtccgcgcggggctcgccgcggcgctc
gacgatccggcgcgcggcggggtgccgtggggtggcgtgacgttctcgtcgctgacgagc
ctgcgcggcctgccgtaccgcgtcgtctgcctgctcgggatggacgacggcgtgctgccg
agcctcgcgcgcgcagacgaattcgatttgatggccgtgttgccgaagctcggcgaccgg
cagcgccgcgacgacgagcgcaacctgttcctcgacctgctgctcgctgcccgcgatcgg
ctgatgatcgcctacacgggccgcagcattcgcgacaacgcgccgttgccgcccgcggcg
ctcgtcgacgaactgctcgatcatctcgcgctcgtcacggccgggcccgacgccgcaccg
gatgcggtcgacgccgcgcgacgcgcgttcatcgtcgagcatccgctgcaaccgttcgcg
gccgcctatttccagccgggcagcgaactcgtttcgtatgacgccgagcgtgcgacgctc
gcgtcactgctggccgccgaggcatcgcgcgacggggcgcgcgagctgcggttcttcgcg
cagccgttgccggccgaaccggtcgagcccgtcgcgttcagcgaattcgagcgcttctgg
cggcatccggcgcgtgcggtgctgcgcgcgcggctcggcatcgtgctggccgacgcgcag
gccgaactgctcgacacggagccgttcgcgctcgacttcgccggcagcgacgcacttgcc
gagcgcgtgctgccgctcctgatcgaatcgggcgacgcagccgtgcacgatcatgcgctg
cgcattgccgatgcgagccccgaactgccgggcggtgcgacgggtgccgtgtggcgcgac
caggcgctcggctcgatgacgcagcttgcgtcgaacgtgcgccgtgcgctggccgacggc
atggagcggcggccgttctcgcttgttgtcgcgccggcgtggccggacaccgaacaggcg
ctgttcggcgccgacgacgcgatgctgtcagccgacgcggtgagcacgccgctcgaattg
cacggcacgctgaaccggctgacgccggccgggcagatcatctaccgttatgcgcgggcg
agcgcgcgcgattacctgtccgcgtggctcgcgcatctcgtctactgcgcggtcgagccc
ggcggcccgcgccgcacgctgtggttcggcagcggcggcgcgttcgagctgacgcccgtc
gcggcgccgctcgaacggctcgcgccgctggccgcgctgtttcgcgcggggcggcgcatg
ccgctgcggtttttcccgcgcagcgcgtgggcgagggtgtccgacggcgaagccaaggcc
gcgagcgtctggatcaacgagcgcgtcgtgagcgaagccgacgatccggccatcgcgatc
gcgtggcgcggcgcgcatgcgtcgctcgacgagccgttcggcacgctcgcgaagctcgtg
ttcgagccgctcgtcgaacatctgaaggaggttgcatga
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