Burkholderia stabilis: BBJ41_09200
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Entry
BBJ41_09200 CDS
T04946
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bstl
Burkholderia stabilis
Brite
KEGG Orthology (KO) [BR:
bstl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bstl03016
]
BBJ41_09200
Enzymes [BR:
bstl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BBJ41_09200
Transfer RNA biogenesis [BR:
bstl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BBJ41_09200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AOR67706
LinkDB
All DBs
Position
1:complement(1981283..1983367)
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AA seq
694 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFDKPAAGELMQEADTA
AQQIDLDFLWECAPSDEFAYTALAEEYFGAAYGPVERAALVLRLHGSPVYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQAQYEEELKAGKLPEAFAGKVLGLLTRPDKNAIEYKA
MEAAAGARGVSPARLMLDCGGIASPRALHEARFLAEFFPHGTGFPSVAVGALPDDLPRAD
VEAFSIDDITTTEIDDAFSVEHLSDGRVRIGVHIAAPALGIVRGDAVDAIARTRLSTVYM
PGDKITMLPDDVVDVFTLKEGDYRPALSLYSIVNRETQEIVANETRAELVFVKNNLRHNT
LDELVNEETLAAGTGDYPHKEDIAVLWPLAQALFEKRQLARAGYGLKREVQRNTDYNFYV
EGEHVSITPRRRGSPLDLIVSELAILANSTWGAFLHDHTVPGIYRSQRGFGAPGPKRTRM
QTSAAPHEGLGVPQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLYAV
VQGFDDTYTAYADYQRRMEYFWCLRWLAQEQKKHVVASVVKGDLVRLEEIPLLLHVPGLG
VHARGTRVLLDVMSLDELTIEASVRLLNVLDAPTVTGGDTAEDEDDAEGGDDTLIDAEDA
SAETEAEALAESDGAAAAAGEAANGNDSEEGRAS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgacgcatttcaggtcgagttgcccggcgggcggcgggcgaaggtgcgcgcgaaagac
gtgctgatcgaattcgacaagccggccgcgggcgaactgatgcaggaggccgacacggcc
gcgcagcagatcgatctggatttcctgtgggaatgcgcgccgtccgacgagttcgcgtat
acggcgctggccgaggagtacttcggcgcggcgtacggtccggtcgagcgcgcggcgctg
gtgctgcggctgcacggctcgcccgtctacttccgccgcaaggggcgcggccagtaccag
cgcgcaccggaagagcagctcaagatggcgctcgcgtcgctcgagcgcaagcgccagcag
gcgctcgtgcaggcgcagtatgaagaggagctgaaggccggcaagctgccggaggcattc
gcgggcaaggtgctcgggctgctgacgcggccggacaagaacgcgatcgaatacaaggcg
atggaagcggcggccggcgcgcgcggcgtgtcgccggcgcggctgatgctcgactgcggc
ggcatcgcgtcgccgcgcgcgctgcacgaggcgcgctttctcgcggaattcttcccgcac
ggcacgggcttcccgtccgtcgcggtcggcgcgctgccggacgacctgccgcgcgcggac
gtcgaggcgttctcgatcgacgacatcacgacgaccgaaatcgacgacgcgttctcggtc
gagcacctgtccgacggccgggtgcggatcggcgtgcacatcgcggcgccggcgctcggc
atcgtgcgcggcgatgcggtcgacgcgatcgcgcgcacgcgcctgtcgaccgtctacatg
ccgggcgacaagatcacgatgctgccggacgacgtcgtcgacgtgttcacgctgaaggag
ggcgattaccgcccggcgctgtcgctgtacagcatcgtcaaccgcgaaacgcaggagatc
gtcgcgaacgaaacgcgcgccgaactcgtgttcgtgaagaacaacctgcgtcacaacacg
ctcgacgaactggtcaacgaagagacgctcgcggccggcaccggcgactatccgcacaag
gaagacatcgcggtgctgtggccgctcgcgcaggcgctgttcgagaagcgccagctcgcg
cgcgccggctacggcctgaagcgcgaagtacagcgcaacaccgactacaacttctatgtc
gaaggcgagcacgtgtcgatcacgccgcgccgccgtggttcgccgctggacctgatcgtg
tcggaactcgcgattctcgcgaactcgacctggggcgcgttcctgcacgaccacacggtg
cccggcatctaccgctcgcagcgcggcttcggcgcgccgggcccgaagcgcacgcggatg
cagacgtcggccgcaccgcacgaaggcctcggtgtgccgcagtacgcctggagcacgtcg
ccgctgcgccgctacgtcgacctcgtgaaccagtggcagttgctcgcgtgcgtgcagcat
ggcgtgaccgcgaagctcgccgcgccgttcaagccgaaggacgccgacctgtacgcggtc
gtgcagggcttcgacgatacctacacggcctacgccgactaccagcgccggatggagtac
ttctggtgcctgcgctggctcgcgcaggagcagaagaagcacgtcgtcgcgagcgtggtg
aagggcgatctcgtgcgcctcgaggaaatcccgctgctgctgcacgtgccggggctcggc
gtgcatgcgcgcggcacgcgcgtgctgctcgacgtgatgtcgctcgacgagctgacgatc
gaggcgtcggtgcgattgctgaacgtgctcgacgcgccgaccgtgacgggcggcgatacg
gccgaggatgaggacgacgccgaaggcggcgacgataccctgatcgacgcggaagacgcc
tcggcggaaaccgaggcggaagcgctggccgaatcggacggtgcggcggcagcggccggc
gaagccgcgaacggcaacgacagcgaagaggggcgcgcatcatga
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