Burkholderia stabilis: BBJ41_11425
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Entry
BBJ41_11425 CDS
T04946
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bstl
Burkholderia stabilis
Pathway
bstl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bstl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBJ41_11425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bstl03021
]
BBJ41_11425
03400 DNA repair and recombination proteins [BR:
bstl03400
]
BBJ41_11425
Enzymes [BR:
bstl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBJ41_11425
Transcription machinery [BR:
bstl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBJ41_11425
DNA repair and recombination proteins [BR:
bstl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBJ41_11425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
UbiD
BSH_YknX
BSH_CzcB
Motif
Other DBs
NCBI-ProteinID:
AOR68092
UniProt:
A0AAJ5N5Q7
LinkDB
All DBs
Position
1:2447456..2451562
Genome browser
AA seq
1368 aa
AA seq
DB search
MQYSFTEKKRIRKSFAKRPIVHQVPFLLATQLESFSTFLQADVLATQRKPEGLQAAFTSV
FPIVSHNGFARLEFVSYALSAPAFNIKECQQRGLTYCSALRAKVRLVILDKESPNKPVVK
EVKEQEVYMGEIPLMTPTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSAR
IIPYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKAIGLTPEQILANFFVFDNFTLMDE
GAQLEFVPERLRGEVARFDITDRDGKVIVQKDKRINAKHIRDLEAAKTKFISVPEDYLLG
RVLAKNVVDGDTGEVIASANDEVTESVLEKLREAGIKDIQTLYTNDLDQGPYISSTLRVD
ETTDRTAARIAIYRMMRPGEPPTEEAVEALFNRLFYSEEAYDLSKVGRMKFNRRVSRDEI
TGPMTLQDDDILATIKILVELRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAHLNEYGFLETPYRKV
VDSKVTDQIDYLSAIEEGRYMIAQANAAIDENGTLIDELVSSREAGETMMVTPDRIQYMD
VAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKPVVGTGIERTCAVDSGT
TVQAFRGGVVDYVDAGRIVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPIVKMG
DKVSRGDVLADGASTDLGELALGQNMLIAFMPWNGYNFEDSILISEKVVADDRYTSIHIE
ELNVVARDTKLGPEEITRDISNLAEVQLGRLDESGIVYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIQRDKRAQQIIDDELK
RYRLDLNDQLRIVEGDAFQRLARMLVGKVANGGPKKLAKGTKIDQAYLEDLDHYHWFDIR
LADDEAAAQLEAIKNSIEEKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKIVPIEDMPYMADGRPADVVLNPLGVPSRMNVGQVLEVHLGWAA
KGLGWRIGEMLQRQAKIEEMRVFLTKIYNDSGRQEDLESFTDDEILELAKNLREGVPFAT
PVFDGATEEEMGKMLDLAFPDDIAEQLGMNPSKNQVRLYDGRTGEMFERRVTLGYMHYLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVNGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSLGIDIDLDRN
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgcaatattccttcaccgagaagaagcgcattcgcaagagtttcgcgaagcgccccatc
gttcaccaagttcctttcttgctggctacccagcttgaatcattcagcacgtttctgcaa
gccgatgtactggcgacgcaacgcaagcctgaaggtttgcaggccgccttcacatcggta
tttcccattgtttcgcacaacggtttcgcgcgcctcgagttcgtgagctatgcgttgtcc
gcgccggcattcaacatcaaggaatgccagcagcgtggcctgacgtactgctccgcgctg
cgcgcgaaggtccgcctcgtcatcctcgacaaggaatcgccgaacaagccggtcgtcaag
gaagtgaaggagcaggaagtgtacatgggcgaaattccgctcatgacgccgacgggctcg
ttcgtcatcaacggcaccgagcgtgtcatcgtctcgcagctgcaccgttcgccgggcgtg
ttcttcgaacacgacaagggcaagacgcacagctcgggcaagctgctgttttcggcacgg
atcattccgtaccgcggctcgtggctcgacttcgaattcgatccgaaggacatcctgtac
ttccgcgtcgaccgtcgccgcaagatgccggtcacgatcctgctgaaggccatcggcctc
acgccggaacagatcctcgcgaacttcttcgtgttcgacaacttcacgctgatggacgaa
ggcgcgcaactcgagttcgtgcccgagcgtctgcgtggtgaagtcgcgcgtttcgacatc
acggatcgtgatggcaaggtcatcgtccagaaggacaagcggatcaacgcgaagcacatt
cgcgacctcgaagccgcaaagaccaagttcatctcggtgccggaagactatctgctcggc
cgcgtgctggcgaagaacgtcgtcgacggcgataccggcgaagtgatcgcgagcgcgaac
gacgaagtcacggaaagcgtgctcgagaagctgcgcgaagcgggcatcaaggacatccag
acgctctacacgaacgatctggaccagggcccgtacatctcgtcgacgctgcgtgtcgac
gaaacgaccgaccgcaccgccgcgcgcatcgcgatctaccgcatgatgcgtccgggcgag
ccgccgaccgaagaagcggtcgaggcactgttcaatcgtctgttctacagcgaagaagcg
tacgacctgtcgaaggtcggccgtatgaagttcaaccgccgcgtcagccgtgacgagatc
accggcccgatgacgctgcaggacgacgacatcctcgcgacgatcaagattctcgtcgag
ctgcgcaacggcaagggcgaagtggacgacatcgaccacctcggcaaccgtcgcgtgcgt
tgcgtcggcgaactggcggaaaaccagttccgcgcgggtctcgtgcgtgtcgaacgcgcg
gtcaaggaacgcctcggccaggccgaaagcgaaaacctgatgccgcacgacctgatcaac
tcgaagccgatttcgtcggcgatccgcgagttcttcggttcgtcgcagctgtcgcagttc
atggaccagaccaacccgctgtcggaaatcacgcacaagcgccgtgtttccgcactgggc
ccgggcggtctgacgcgcgagcgcgcaggctttgaagtccgcgacgtgcacccgacccac
tatggtcgcgtgtgcccgatcgaaacgccggaaggtccgaacatcggcctgatcaactcg
ctcgcactgtatgcgcacctgaacgaatacggcttcctcgagacgccgtaccgcaaggtc
gtggacagcaaggtgaccgaccagatcgattacctgtcggcgatcgaggaaggccgctac
atgatcgcgcaggcgaacgccgcgatcgacgagaacggcacgctgatcgacgaactcgtg
tcgtcgcgtgaagccggcgaaacgatgatggtcacgccggaccgtatccagtacatggac
gtggcgccgtcgcagatcgtgtcggtcgcagcctcgctgattccgttcctcgagcacgat
gacgcgaaccgtgcactgatgggttcgaacatgcagcgtcaggccgtgccgtgtctgcgt
ccggaaaagccggtcgtcggtacgggcatcgagcgtacctgcgcggtcgactcgggcacg
acggttcaggcgttccgcggcggtgtcgtcgattacgtcgacgcaggccgtatcgtgatt
cgcgtgaacgacgacgaagcggtcgcaggtgaagtcggtgtcgacatctacaacctgatc
aagtacacgcgttcgaaccagaacacgaacatcaaccagcgtccgatcgtgaagatgggc
gacaaggtctcgcgcggcgacgtgctggccgacggcgcctcgacggacctgggcgagctc
gcgctcggccagaacatgctgatcgcgttcatgccgtggaacggctacaacttcgaggat
tcgatcctgatctcggagaaggtcgtggccgacgatcgctacacgtcgatccacatcgaa
gagctgaacgtcgttgcacgcgacacgaagctcgggccggaagaaatcacgcgcgacatc
tcgaacctggcggaagtccagctcggccgtctcgacgaatcgggcatcgtgtacatcggt
gctgaagtcgaagcaggcgacgtgctggtcggcaaggtcacgccgaagggcgagacccag
ctgacgccggaagagaagctgctgcgcgcgatcttcggcgagaaggcgtcggacgtgaag
gacacgtcgctgcgcgtgccgtcgggcatgagcggtaccgtgatcgacgtccaggtcttc
acgcgtgaaggcatccagcgcgacaagcgtgcgcaacagatcatcgacgacgaactgaag
cgctaccgtctcgacctgaacgaccagctgcgcatcgtggaaggcgacgcgttccagcgt
ctcgcacgcatgctcgtgggcaaggtcgcgaacggcggtccgaagaagctcgccaagggc
acgaagatcgaccaggcttacctggaagacctcgaccactaccactggttcgacatccgc
cttgcggacgacgaagcagcggcgcagctcgaagcgatcaagaactcgatcgaagagaag
cgtcaccagttcgacctcgcgttcgaagagaagcgcaagaagctcacgcaaggcgacgaa
ctgccgccgggcgtgctgaagatggtcaaggtgtacctcgcggtcaagcgccgtctgcag
cctggcgacaagatggcaggccgtcacggtaacaagggtgtcgtgtcgaagatcgtcccg
atcgaagacatgccgtacatggccgatggccgtccggcagacgtcgtgctgaacccgctc
ggcgtgccgtcgcggatgaacgtgggtcaggttctggaagtgcacctcggctgggccgcg
aagggcctcggctggcgtatcggcgaaatgctgcagcgtcaggcgaagatcgaggaaatg
cgcgtgttcctgacgaagatctacaacgactcgggccgccaggaagatctggaaagcttc
accgacgacgagatcctcgaactcgcgaagaacctgcgcgaaggcgtgccgttcgcaacg
ccggtgttcgacggtgcgaccgaggaagaaatgggcaagatgctcgacctcgcgttcccg
gacgacatcgccgaacagctcggcatgaacccgtcgaagaaccaggtccgtctgtacgac
ggccgcacgggtgaaatgttcgaacgtcgcgtgacgcttggctacatgcactacctgaag
ctgcaccacttggtcgacgacaagatgcacgcgcgttcgaccggcccgtactcgctcgtc
acgcagcagccgctgggtggtaaggcgcagttcggtggccagcgtttcggtgaaatggaa
gtgtgggcactcgaagcgtacggcgcgtcctacgtgctgcaggaaatgctgacggtgaag
tcggacgacgtgaacggccggaccaaggtctatgagaacctggtcaagggtgatcacgtc
atcgatgcaggcatgccggaatccttcaacgtgctcgtgaaggaaatccgctcgctcggt
atcgatatcgatctcgaccgcaattaa
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integrated database retrieval system
