Burkholderia stabilis: BBJ41_11435
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Entry
BBJ41_11435 CDS
T04946
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bstl
Burkholderia stabilis
Pathway
bstl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bstl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBJ41_11435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bstl03019
]
BBJ41_11435
03400 DNA repair and recombination proteins [BR:
bstl03400
]
BBJ41_11435
Enzymes [BR:
bstl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBJ41_11435
Messenger RNA biogenesis [BR:
bstl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BBJ41_11435
DNA repair and recombination proteins [BR:
bstl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BBJ41_11435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AOR68094
LinkDB
All DBs
Position
1:2456150..2457997
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AA seq
615 aa
AA seq
DB search
MSRALEILDEVFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRRETGQ
GAGIVVSPLIALMQDQVAALREVGVRAAYLNSTLSGAEAAATERALREGEIDLLYVAPER
LMTGRFLDLLERAKIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPSVPRIALTATAD
AITRDEIIHRLALDDARVFVSSFDRPNIRYRIVEKDNARSQLLDFIRAEHTNADGTTDAG
VVYCLSRRKVEETAEWLKAQGVRALPYHAGMEFEVRQKHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMAYGLGDVVQQRKMIDESDADD
AHKRVQTSKLDALLGLCETISCRRVRLLNYFGEASQPCGNCDTCIEPPDSWDATREAQMA
LSCVFRAQRASGFNFGSSHLIEILRGGRTEKVLQRGHDQLTTFGIGASLSEPEWRAIFRQ
LVAYGYLTVDHGGFGALVLTEAAKPVLKNEEKVTLRRYVKPQRTRQSSSRSGTRVDPTAG
MGARERARWDALRAWRAETAKTDGVPAYVIFHDATLAEIARNAPESIDDLRHIPGMGVRK
LERFGDEIIDVVESA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgccctcgaaattctcgacgaagtttttggttattccgcatttcgcggccag
cagggcgagatcgtcgaacacgtcgctggcggcggcgattgcctcgtgctgatgcccacc
ggcggcggcaagtcgctgtgctatcagatcccggcgctgctgcgccgcgagaccgggcag
ggcgccggcatcgtcgtgtcgccgctgatcgcgctgatgcaggaccaggtcgccgcgctg
cgcgaagtcggtgtgcgtgcggcgtacctgaattcgacgctgtcgggcgccgaagctgcc
gccaccgagcgtgcgttgcgcgaaggcgaaatcgatctgctgtatgtcgcgccagaacgg
ctgatgacggggcgcttcctcgatctgctggagcgcgcgaagatcggcctgttcgcgatc
gacgaagcgcactgcgtgtcgcaatgggggcacgatttccgcccggaatacatccagttg
tcggtgttgcacgagcgcttcccgtcggtgccgcgcatcgcgttgaccgccacggccgat
gcgatcacgcgcgacgagatcatccatcgtctcgcgctcgacgatgcgcgcgtattcgtg
tcgagcttcgaccgcccgaacatccgctaccggatcgtcgagaaggacaacgcgcgttcg
cagttgctcgatttcatccgggccgaacacacgaatgcggacggcacgacggacgctggc
gtcgtctattgcctgtcgcgccgcaaggtcgaggaaacggccgagtggctgaaggcgcag
ggcgtgcgcgcgctgccttatcacgcgggcatggagttcgaggtgcggcagaagcaccag
gagatgttccagcgcgaggaaggcatcgtgatgtgcgcgacgatcgcgttcggcatgggg
atcgacaagccggacgtgcgcttcgtcgcccacctggatctgccgaagagcgtcgaaggc
tattaccaggaaaccgggcgcgcgggccgcgacgggatgcccgcgaatgcgtggatggcg
tatggcctcggcgacgtcgtccagcagcgcaagatgatcgacgagtccgatgcggacgat
gcgcacaagcgcgtccagacgtcgaagctcgacgcgctgctggggctgtgcgagacgatc
tcgtgccgtcgcgtgcggttgctgaactacttcggcgaggcgagccagccgtgcggcaac
tgcgatacgtgcatcgagccgcccgattcgtgggacgcgacgcgcgaggcgcagatggcg
ctgtcgtgcgtattccgtgcgcagcgcgcgagcggcttcaatttcggttccagccatttg
atcgagatcctgcgcggcgggcgcaccgagaaggtgctgcagcgcggccatgaccagctc
acgacgttcgggatcggcgcgtcgctgtccgagcccgagtggcgtgcgattttccggcaa
ctcgtcgcgtacggctacctgaccgtcgatcacggcggtttcggcgcgctcgtgctgacc
gaggcggcaaaaccggtgctgaagaacgaggagaaggtcacgctgcgccgctatgtgaag
ccgcagcgcacgcgccagtcgtcgagccgcagcggcacgcgtgtcgatccgacggccggc
atgggcgcgcgcgagcgcgcacggtgggatgcactgcgcgcgtggcgtgcggaaaccgcg
aaaacggacggggtgccggcctacgtgatcttccacgacgcgacgcttgctgaaatcgcg
cgcaacgcgccggagtcgatcgacgacctgcgccatatccccggcatgggcgtgcgcaag
ctcgagcgcttcggcgacgagatcatcgacgtcgtcgagtcggcctga
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