Burkholderia stabilis: BBJ41_14885
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Entry
BBJ41_14885 CDS
T04946
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
bstl
Burkholderia stabilis
Pathway
bstl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bstl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBJ41_14885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bstl03400
]
BBJ41_14885
Enzymes [BR:
bstl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
BBJ41_14885
DNA repair and recombination proteins [BR:
bstl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBJ41_14885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AOR68703
LinkDB
All DBs
Position
1:3194253..3194804
Genome browser
AA seq
183 aa
AA seq
DB search
MADELPDLIAPRLDVLFCGINPGMTAAATGHHFAGRSNRFWRVIHLAGFTPAEIAPQDDR
AILRYGCGVTAVVKRPTASADQLSRAEFVAAATEFEQKVARYGPRFVAFLGKAAYSALSG
QREVAWGLQPARMQRASVWVLPNPSGRNLAFGLDDLVDAYRQLYLQAKTLSGRQPQEQPD
ATR
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
gtggctgacgaactccccgacctcatcgcccctcgtctcgacgtgctgttctgcgggatc
aatcccggcatgaccgccgccgcgaccgggcatcacttcgccgggagaagcaaccgcttc
tggcgcgtgatccatctcgcgggtttcacgccggcggaaatcgcgccgcaggacgatcgc
gcaatcctgcggtacggctgcggcgtgacggcggtggtgaagcggccgacggcaagcgcc
gatcagctttcgcgcgcggaattcgtcgccgcggcgacggagttcgagcagaaggtagcg
cgttatgggccgcgcttcgtcgcctttctcggcaaggcggcgtactcggcgctgtcgggg
cagcgcgaagtcgcgtggggattgcagccggcacgcatgcagcgcgccagcgtctgggtg
ctgccgaaccccagcggaagaaatctcgcgttcgggctcgacgatctagtcgatgcatac
cgccagctttatctgcaggcaaagaccctttccggtcgtcaaccgcaggagcagccggat
gcgacgcggtaa
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