Burkholderia stabilis: BBJ41_17680
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Entry
BBJ41_17680 CDS
T04946
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bstl
Burkholderia stabilis
Pathway
bstl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bstl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBJ41_17680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bstl03019
]
BBJ41_17680
03016 Transfer RNA biogenesis [BR:
bstl03016
]
BBJ41_17680
Enzymes [BR:
bstl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BBJ41_17680
Messenger RNA biogenesis [BR:
bstl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BBJ41_17680
Transfer RNA biogenesis [BR:
bstl03016
]
Prokaryotic type
tRNA degradation factors
BBJ41_17680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
UPF0181
Motif
Other DBs
NCBI-ProteinID:
AOR69214
UniProt:
A0AAJ5N7C7
LinkDB
All DBs
Position
1:3788092..3790239
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AA seq
715 aa
AA seq
DB search
MSMFNKVVKEFQWGQHKVRLETGEVARQASGAVIVDVEDTVVLATVVGAKSAKPGQDFFP
LTVDYLEKTYSAGKIPGGFFRREGRPSEHETLTSRLIDRPLRPLFPEGFYNEVQVVIHVL
SVNPEIPADIPALIGASAALAVSGLPFNGPVGAARVAYIDNAYVLNPTRDQIKASSLDLV
VAGTERAVLMVESEADQLSEEVMLGAVVFGHEQMQVAIDAIHELVREGGKPEWDWQPAPK
NEPLIARVTELAQNDLLAAYQLRDKQARSTKLKEVYSATSAKLEEDAQAAGTAAADKATV
GNVLFDIEAKIVRSQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVV
ATLGTKGDEQIIDALEGEYRERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVK
CLPSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGN
KFAVLTDILGDEDHLGDMDFKVAGTEQGVTALQMDIKIQGITKEIMQVALAQAKEGRMHI
LGKMTSAVSGANTQLSEFAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDG
VVTIASTNSDGMAEAKKRIEQITAEIEVGQVYEGTVLKLLDFGAIVNLLPGKDGLLHISE
IVNERVKDINDYLKEGQQVKVKVIQTDEKGRVRLSAKALLNEAAAASQSDTPPQQ
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgttcaacaaggtcgtgaaggaattccagtggggccagcacaaggtgcgcctc
gaaaccggtgaagtcgctcgccaggcgagcggcgccgtgatcgtcgacgtcgaagatacc
gtcgtgctggcaaccgtcgtcggtgcgaagtcggcgaagccgggtcaggacttcttcccg
ctgaccgtcgactacctcgaaaagacctactcggccggcaagatcccgggcggcttcttc
cgccgcgaaggccgtccgtcggaacacgagacgctgacgtcgcgcctgatcgaccgtccg
ctgcgcccgctgttcccggaaggcttctacaacgaagtccaggtcgtgatccacgtgctg
tccgtgaacccggaaatcccggcggacatccccgcgctgatcggcgcatcggctgcgctc
gccgtgtcgggcctgccgttcaacggtccggtcggtgccgcgcgcgtcgcgtacatcgac
aacgcatacgtgctgaacccgacgcgtgaccagatcaaggcatcgagcctcgatctcgtc
gtcgccggtacggagcgcgccgtgctgatggtcgaatcggaagccgatcagctgtcggaa
gaagtgatgctgggcgccgtggtgttcggtcacgagcagatgcaagtcgcgatcgacgcg
atccacgaactggtgcgcgaaggcggcaagcccgagtgggactggcagccggcgccgaag
aacgaaccgctgatcgcgcgcgtgaccgagctggcgcagaacgacctgctcgccgcttac
cagctccgcgacaagcaggctcgctcgacgaagctgaaggaagtctactcggcgacctcg
gcgaagctcgaggaagacgcgcaggcagccggtacggcagcagccgacaaggctaccgtc
ggcaacgtcctgttcgacatcgaagcgaagatcgtccgttcgcagatcctgaacggcgag
ccgcgcatcgacggtcgcgacacgcgcaccgtgcgcccgatcgaaatccgcaccggcgtg
ctgccgcgtacccacggctcggcgctgttcacgcgcggcgagacgcaggcgctggtcgtc
gcgacgctcggcacgaagggtgacgagcagatcatcgacgcgctcgaaggcgaataccgc
gagcgcttcatgctccactacaacatgcccccgttcgcgaccggtgaaacgggtcgcgtc
ggctcgccgaagcgccgcgaaatcggccacggccgcctcgcgaagcgcgcgctggtcaag
tgcctgccgagcgccgacgaattcggctactcgatccgcgtcgtgtcggaaatcaccgag
tcgaacggttcgtcgtcgatggcatcggtgtgcggcggctgcctcgcgctgatggacgcc
ggcgtgccgatgaaggcgcacgtcgcgggtatcgcgatgggcctgatcctcgaaggcaac
aagttcgcggtgctgaccgacatcctcggcgacgaagatcacctcggcgacatggacttc
aaggtggccggcacggagcaaggcgtgacggcgctgcagatggacatcaagatccagggc
atcacgaaggaaatcatgcaggtcgcgctcgcacaggcgaaggaaggccgcatgcacatc
ctcggcaagatgacgtcggcggtttcgggtgcgaacacgcaactgtcggaattcgcgccg
cgcatgatcacgatcaagatcaacccggaaaagatccgcgacgtgatcggcaagggtggt
tcggtgatccgcgcgctgacggaagaaacgggcacgaccatcgacatctcggatgacggt
gtcgtgacgatcgcgagcacgaacagcgacggcatggccgaagcgaagaagcgcatcgag
caaatcacggccgagatcgaagtcggccaggtgtacgaaggtacggtgctcaagctgctc
gatttcggcgcgatcgtgaacctgctgccgggcaaggacggcctgctgcacatctcggaa
atcgtcaacgagcgcgtgaaggacatcaacgactacctgaaggaaggccagcaagttaag
gtcaaggtaatccagacggacgagaagggtcgcgtgcgtctgtcggcaaaggcgctgctg
aatgaagcagcggcggcgtcgcagtcggacacgccgccgcagcagtaa
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