Burkholderia stabilis: BBJ41_20040
Help
Entry
BBJ41_20040 CDS
T04946
Name
(GenBank) farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bstl
Burkholderia stabilis
Pathway
bstl00100
Steroid biosynthesis
bstl00909
Sesquiterpenoid and triterpenoid biosynthesis
bstl01100
Metabolic pathways
bstl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bstl00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
BBJ41_20040
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
BBJ41_20040
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bstl01006
]
BBJ41_20040
Enzymes [BR:
bstl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
BBJ41_20040
Prenyltransferases [BR:
bstl01006
]
Terpene biosynthesis
Squalene/phytoene synthase
BBJ41_20040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AOR69897
LinkDB
All DBs
Position
2:440273..441337
Genome browser
AA seq
354 aa
AA seq
DB search
MTTRTDSAYLLGDLLKNVSRSFYLTLRVLPDGMRDPVGLAYLLARAADTIADTALVAPDR
RAALLTDLRDEIERLGDGAALSRSLEDVTRMQTDSHEHVLLGSMEPMLALLRAQPDADRA
SIRKVVATLTAGMEFDLRTFPDEQSGQVASLPNREMLDRYTYLVAGCVGEFWTDMTGAHT
RAARGWDLPDMREKGIRFGKALQMTNILRDCAKDLRIGRCYLPDDVLGAHGLGVADLMQP
GASARARGVLVDLLRVALDQYRDACLYTLAIPRRFVRLRLACLWPIMIGLETLELLAGHD
AWLDPAKPAKVPRKRIYRIMASSLALVGSNAAIRARMTALADAVNARLGQPASR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgacgactcgaaccgattctgcctacctgctcggcgacctgctgaagaacgtttcccgc
tccttctacctgacgctgcgcgtgctgcccgacggcatgcgcgacccggtcggcctcgcg
tatctgctcgcgcgcgcggccgacacgatcgccgacacggcgctcgtcgcgcccgatcgc
cgcgcggcgttgctgaccgacctgcgagacgagatcgagcggctcggcgacggcgcggcg
ctgtcgcgttcgctcgaggacgtgacgcggatgcagacggattcgcacgagcacgtgttg
ctcggctcgatggagccgatgctcgcgctgctgcgcgcgcagccggacgccgaccgcgca
tcgatccgcaaggtcgtcgcgacgctgacggcggggatggagttcgacctgcgcacattc
ccggacgaacagtcggggcaggtcgcgtcgctgccgaaccgcgagatgctcgaccgctac
acgtacctcgttgcgggttgcgtcggcgagttctggaccgacatgacgggtgcgcacacg
cgcgccgcgcgcggctgggacctgccggacatgcgcgagaagggcatccgtttcggcaag
gcgctgcagatgaccaacatcctgcgcgactgcgcgaaggacctgcgcatcggccgctgc
tacctgcccgacgatgtgctgggcgcgcacgggctcggcgtcgccgacctgatgcagccc
ggcgcgtcggcgcgtgcgcgcggcgtgctggtcgacctgctgcgcgtggcgctcgaccag
tatcgcgacgcgtgcctgtatacgctcgcgatcccgcgccgcttcgtgcggctgcgcctt
gcgtgcctgtggccgatcatgatcggtctcgaaacgctcgaactgctggccggccacgat
gcatggctcgacccggcgaaaccggccaaggtgccgagaaagcgcatctaccggatcatg
gcgtcgtcgctcgcgctggtcggctcgaacgccgcgatccgcgcacgcatgaccgcgctc
gccgacgcggtgaacgcgcggctcggccagccggcatcgcgttga
DBGET
integrated database retrieval system
