Burkholderia stabilis: BBJ41_22650
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Entry
BBJ41_22650 CDS
T04946
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bstl
Burkholderia stabilis
Pathway
bstl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bstl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBJ41_22650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bstl03019
]
BBJ41_22650
Enzymes [BR:
bstl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BBJ41_22650
Messenger RNA biogenesis [BR:
bstl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BBJ41_22650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_25
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AOR70360
UniProt:
A0A1D7ZKG8
LinkDB
All DBs
Position
2:1035987..1037432
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AA seq
481 aa
AA seq
DB search
MSFASLGLIDPLLRNVQDLNYQTPTPVQAKAIPAVLSGKDVMAAAQTGTGKTAGFALPLL
QRLVQHGPTVSSNRARVLVLVPTRELAEQVLQSFITYGKGLDLRFLAAYGGVSINPQMMK
LRKGVDVLVATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFANELDAVFAALPARR
QTLLFSATFTDDIRAMAAGILRGPVNISVSPPNATASKIKQWVVPVDKKNKPDLFMHLVA
ENNWEHALVFVKTRKGVDYLAAMLDDAGYAVDTIHGDKPQPARLRALDRFKTGEVNMLVA
TDVAARGLDIDDLPLVINVDLPIVAQDYVHRIGRTGRAGASGVAVSLVCADEAPQLAAIE
ALIRQTLPREEEPGFEAEHRVPQTSATGEIIKKPKKPKKPKVPHAAPSAKPAPGKKARPQ
NGESKRKPAAPRAVAAGKGASVSGGNPFSTQKPRSKPAGKPAAGSRKPAGKPAGGRGKRQ
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgcctcgcttggcctgatcgatcccttgctgcgtaatgtgcaggatctcaat
taccagacacctacgccggtgcaggccaaggcgattcctgccgtgctcagcggcaaggac
gtcatggctgcggcacagaccggcacgggcaagacggcgggtttcgcgcttccgctgttg
cagcggctggtgcaacacggcccgacggtgtccagcaaccgcgcgcgcgtcctggtgctg
gtgcccacgcgcgagctggccgaacaggtgctgcaaagcttcatcacgtacggcaaaggc
ctcgacttgcgattcctggctgcctacggcggcgtgagcatcaacccgcagatgatgaag
ttgcgcaaaggcgtcgatgtgctcgttgccacgcccggccgtttgctggatctcaaccgc
cagaacgcggtgcagttcgatcaagtgcaaacgctggtgctggatgaagccgaccgcatg
ctggatctgggctttgcgaacgaactcgacgccgtctttgccgcgttgcccgcccggcgc
cagacgctgctgttctccgccacgtttaccgacgatatccgcgcgatggcagcgggcatt
ctgcgcggcccggtcaacatcagcgtcagcccgcccaatgccacggccagcaagatcaag
cagtgggtggtgccggtggacaagaagaacaagcccgatctcttcatgcacctcgtggcc
gagaacaactgggagcacgcgctggtgttcgtcaaaacgcgcaaaggcgtggattacctg
gcggccatgctggatgacgcgggctacgcggtcgacaccattcacggcgacaaaccgcag
cccgcacgcctgcgtgcgctcgatcgcttcaagaccggcgaagtcaacatgctggtggcc
accgatgtcgccgcgcgcgggctcgatatcgacgacctgccgctggtgatcaacgtcgat
ctgccgatcgtggcgcaagactacgtgcaccgtattggccgcacgggccgcgcgggcgcc
agcggcgtggcggtgtccctcgtgtgtgccgatgaagcgccgcaactggccgcgatcgaa
gcgctgatccggcaaacgctgccgcgcgaggaagagccgggtttcgaagccgaacaccgc
gtgccgcaaaccagcgcaacgggcgagatcatcaagaaacccaaaaagcccaagaagccg
aaagtgccgcacgctgcgcccagcgccaagccggcgcccggcaaaaaggcacgcccgcaa
aatggcgaaagcaaacgcaagcctgcggcgccgcgcgcggtagccgcaggtaaaggcgcg
agtgtgtccggcggcaatccgttcagcacgcaaaagccgcgcagcaaacccgccggcaag
ccggccgcgggttcacgcaagccggccggcaaacctgcaggtggccgcggcaaacgtcaa
ccgtga
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