Burkholderia stabilis: BBJ41_29910
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Entry
BBJ41_29910 CDS
T04946
Name
(GenBank) adenosine deaminase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bstl
Burkholderia stabilis
Pathway
bstl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bstl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBJ41_29910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bstl03000
]
BBJ41_29910
03400 DNA repair and recombination proteins [BR:
bstl03400
]
BBJ41_29910
Enzymes [BR:
bstl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BBJ41_29910
Transcription factors [BR:
bstl03000
]
Prokaryotic type
Helix-turn-helix
AraC family
BBJ41_29910
DNA repair and recombination proteins [BR:
bstl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBJ41_29910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AOR71663
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All DBs
Position
2:complement(2695658..2697130)
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AA seq
490 aa
AA seq
DB search
MVYSRFMRLDPDTCYDALLSRNRRFDGWFFVGVATTGVYCRPVCPVKPPKAGNCSYYPTA
AAAEKAGFRPCMRCRPELAPGHGLLDLSGNLADAAAALIENDFLNEHSVDALAQRVGVTE
RHLRRIFAAQFGVSPVEFAQTHRLLMAKRLLTDTALPVAVVASTAGFGSVRRFNDLFRQR
YGLNPLRLRKGAGASANGDMTFPLPYRPPFAWADLMRFLAQRQIDGVERIDAQGYARVVE
LPGRNNHGAGRVTGWLSVAHVPQRFALAVTVSPALTPVVPAVLARVRRLFDLDSRPDVID
AHLGELADGSPGLRVPGAFDGLEMAIRAIAGERLEAVQAGAMLARVAERFGTSLESAPPG
LTHALPSAATLAAVPPAALEAIGFTHEAAQAIVSLARAVADGALALEPMAPLDATLAVLR
AMRGFDERAVQYVAMRAMAWPNAFPADDALLPARADRAHMPSSTPHAARWAPWRAYAALH
VWRLHGEVLQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggtttacagtcgtttcatgcgcctcgatcccgacacctgctacgacgccctgctttcg
cggaaccgccgcttcgacggctggttcttcgtcggtgtcgcgacgaccggcgtgtattgc
cgccccgtatgcccggtgaagccgccgaaagcgggcaactgcagctattacccgaccgcc
gcggccgccgagaaagcgggctttcggccgtgcatgcgttgccgccccgagcttgcgccc
ggccacgggctgctcgacctgtccggcaatctcgcggacgcggccgccgcgctgatcgag
aacgatttcctgaacgagcattcagtcgacgcgctcgcgcagcgggtcggcgtgaccgag
cgccatctgcgccggatcttcgccgcgcagttcggcgtgtcgccggtcgaattcgcgcag
acgcaccgcctgctgatggccaagcggctgctgaccgacaccgcgttgccggtggccgtc
gtcgcatcgacggccgggttcggcagcgtgcggcgcttcaacgatctgttccggcaacgc
tacggcctcaatccgctgcggctgcgcaaaggcgccggcgcatccgccaacggcgacatg
acgtttccgctgccgtaccggccgccgttcgcgtgggccgacctgatgcgctttctcgcg
cagcggcagatcgacggcgtcgagcggatcgacgcgcagggctacgcacgcgtcgtcgaa
ttgccgggcagaaacaatcacggcgccggccgcgtgacgggctggttgtcggtcgcgcac
gtgccgcagcggttcgcgctggccgtcaccgtgtcgcccgcgctgacgccggtcgtacca
gccgtgctcgcgcgcgtgcggcggctgttcgatctcgacagccgccccgacgtgatcgac
gcgcatctcggcgaactcgcggacggctcgcccggcctgcgcgtgcccggcgcgttcgac
ggcctcgagatggcgatccgcgcgatcgcgggcgaacgactcgaagccgtgcaggcgggt
gcgatgctcgcgcgcgtcgccgaacgtttcggtacgtcgctggaaagcgcgccgccggga
ctgacgcacgcgctgccttccgccgcgacgctggctgccgtgccgccggcggcactggaa
gcgatcgggttcacgcacgaagcggcgcaggcgatcgtgtcgctcgcacgcgcggtcgcc
gacggcgcgctcgcgctcgaaccgatggcgccgctcgacgcgacgctcgccgtgctgcgc
gcgatgcgcggcttcgacgaacgcgcggtgcagtacgtcgcgatgcgcgcgatggcctgg
ccgaacgcgttcccggccgacgacgcgctgcttcccgcgcgcgccgaccgagcgcacatg
ccatcatccacgccgcacgcggcgcgctgggcgccgtggcgcgcgtatgccgcactgcac
gtatggcgccttcatggagaagtattgcaatga
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