Bacteriovorax stolpii: C0V70_16090
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Entry
C0V70_16090 CDS
T05263
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bsto
Bacteriovorax stolpii
Pathway
bsto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C0V70_16090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsto03019
]
C0V70_16090
03009 Ribosome biogenesis [BR:
bsto03009
]
C0V70_16090
Enzymes [BR:
bsto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C0V70_16090
Messenger RNA biogenesis [BR:
bsto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C0V70_16090
Ribosome biogenesis [BR:
bsto03009
]
Prokaryotic type
rRNA helicases
C0V70_16090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AUN99599
UniProt:
A0A2K9NVQ4
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All DBs
Position
complement(3262013..3263797)
Genome browser
AA seq
594 aa
AA seq
DB search
MTFQELPLRESLIRAITERGYVEPTEIQAQAIPALATTETDFVGQAQTGTGKTAAFSLPL
LNKIDFTNRDVQALILTPTRELANQITEEIKKFSTYEKVKTLAVYGGVSLEGQIRGLRKD
RPQIVVGTPGRVLDLIDRGVLILDNAKYAVLDEADEMLDMGFIDDVKQILSNLGEDRKTW
MFSATMPAPILSLIKTYLKDPLVVKVQKKTLSNESIDQKHYVVRHNNMSEAICRILDSLE
DYYGMIFCRTKVDAKTLADELNARGYPSDSLHGDMSQQQRDITMKNFKLKKINMLVCTDV
AARGIDVDNLTHVINFGLPQDIESYVHRIGRTGRAGMKGTAITLVEPSERYRLRMVENNT
KARIVQATLPTPAELKEVMVRKELKKFDNVIENLDKLSTDPVFTEKFSELSKEDLLKVMY
NHIFKSQISRYDHSPSLEIQERRPENRDRQNREFNDRGNDRGNDRGSRDQGRPNHSGNMR
FFVNIGKDHGLTLKSLLGSISDMVKVEERLIRNVDMKETFSFLEVPEQYGEVLLKVNTPM
IIDRTVRFELTRSAPMSRPHFGGGDRDRRPSFRSGSNHRNGDRNGNRSERSFRS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
gtgacatttcaagaattgccactacgtgaatctttaattagagcgatcacggagaggggc
tatgtagagccaacagaaatccaggctcaagctattccagcacttgcaacaacagaaaca
gactttgtaggacaagcgcaaacaggtacaggtaaaactgctgccttctcacttccacta
ttaaacaagatcgacttcactaaccgcgatgttcaagcactaatcttaactccaactcgc
gagttagctaaccagattactgaagaaattaaaaaattctctacgtacgaaaaagtaaaa
acacttgctgtttacggtggtgtttctcttgaaggacaaatcagaggattaagaaaagat
cgcccacaaatcgtagtaggaactccaggacgtgttctggatcttatcgatcgtggagtt
ttaattctagacaacgctaaatacgctgtcctggatgaagctgatgaaatgctggatatg
ggattcatcgacgacgtaaaacaaattctttctaaccttggtgaagacagaaaaacttgg
atgttctcggcaactatgccagctccaatcctttctctaattaaaacttacctaaaagat
cctcttgttgttaaagttcaaaagaaaactttatctaacgagtctatcgatcaaaagcac
tacgttgttcgccacaacaacatgagcgaagctatctgcagaatccttgattctctggaa
gactactacggaatgattttctgccgtacaaaagtagatgctaaaactcttgctgacgaa
ctaaacgctcgtggttatccatcagactcacttcacggtgatatgtcacaacaacaacgt
gacatcacaatgaagaacttcaaacttaaaaagatcaacatgctggtttgtacagacgtt
gccgctcgcggaattgacgtagacaaccttactcacgtaatcaacttcggtcttccacag
gatatcgagtcttacgttcaccgtatcggccgtacaggtcgcgcgggaatgaaaggaact
gccatcacccttgttgagccgtcagaaagatacagacttcgcatggtagaaaacaatacg
aaagctcgtattgttcaggccactcttccaactccagcggagttaaaggaagtcatggtt
agaaaagaacttaagaagttcgataatgttatcgaaaatcttgataaactctctacagat
cctgtgtttactgaaaagttcagtgagctttcaaaagaagatttattgaaagttatgtac
aaccatatcttcaaatctcaaatctctcgttacgatcattcaccatcacttgaaatccag
gaaagacgtcctgaaaacagagaccgtcagaaccgtgagttcaatgacagaggaaatgat
agaggcaacgacagaggaagcagagaccagggacgtccaaaccactctggcaacatgaga
ttcttcgttaacatcggtaaagaccacggcctgactcttaaatcacttctgggatcaatc
tcagatatggttaaagtagaagagcgcctgatcagaaacgtagacatgaaagaaacattt
tcttttttagaagttcctgagcaatatggtgaagttttattaaaagttaacactccgatg
atcatcgaccgcactgtgcgtttcgagcttactcgctcggcaccaatgagccgtccacac
ttcggtggtggagaccgcgatcgtcgtccaagctttagaagtggaagcaaccacagaaat
ggagacagaaacggcaacagatctgaaagatctttccgttcttaa
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