Bacteriovorax stolpii: C0V70_17255
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Entry
C0V70_17255 CDS
T05263
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bsto
Bacteriovorax stolpii
Pathway
bsto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C0V70_17255 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsto03019
]
C0V70_17255 (rny)
Messenger RNA biogenesis [BR:
bsto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C0V70_17255 (rny)
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Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
PFF1_TM
Phage_30_3
Motif
Other DBs
NCBI-ProteinID:
AUN99819
UniProt:
A0A2K9NWC2
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Position
complement(3486293..3487852)
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AA seq
519 aa
AA seq
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MNISVILAAVLFAVIGAVIGYVVKNAQVQKDIKEKEGKGNDIIEKAKKSADEIKYKARQE
AKEIAREEKEKSDREINNRTNEIKNQERELAKKDATLDRKIEEHDKEVKVLKEKEIAFEV
SKKLHEEEATKLKKKQDEFSDRLAQVAQMTKEEAKSELLRAMEEEARVDFSKVLRRIEEE
TKEEAEAKSKRIVGIAIQRFAGEYVGEKTIGSVELPSDDVKGRLIGREGRNIRAFEQICG
VDLIIDDTPEVVVISSFNVVRKEIARMVIQKLIADGRIHPAKIEEFHDKSKAEMERQLRD
LGEKAQMEIGVHGIHPEILKLVGALQWRTSYTQNQYQHAIEAAFVCGAMAAELGLNVKQA
RRAALLHDVGKVIDASAEGSHAVVGADFLKKYGESPDIVHAVRAHHDDEKPESVLAHLVA
AADALSGARPGARKAMMESYVSRLTDIEEIVNSFEGVSKSYAISGGREVRVFVENDRVTD
EETVMLSRDIAKKIEEEMSYPGTIKITVLRETKAVGIAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttcggtaatcttggcagctgttctgtttgccgtaatcggagccgtgattggc
tacgtggtaaagaacgcccaagttcaaaaagatatcaaagaaaaagaaggcaaaggaaac
gatatcatcgaaaaggcgaagaagtctgctgatgaaatcaagtacaaagcccgtcaggaa
gcaaaagagatcgcgcgtgaagaaaaagaaaaatcagaccgcgaaatcaacaaccgtact
aacgaaattaaaaaccaagagcgcgaattagctaaaaaagacgcgactcttgaccgcaaa
atcgaagagcacgacaaagaagtaaaagttttaaaagaaaaagaaatcgcttttgaagtt
tctaaaaaacttcacgaagaagaagcaactaaacttaaaaagaaacaagatgagttctct
gatcgccttgctcaggttgctcaaatgacaaaagaagaagctaagagtgaactacttcgc
gcaatggaagaagaagctcgcgtagacttctctaaagtactaagaagaatcgaagaagaa
acaaaagaagaagcagaagctaaatcaaaaagaatcgtgggaattgccattcaaagattc
gccggtgaatacgttggcgaaaaaactatcggttcggttgaacttccaagtgacgatgtt
aaaggtcgcttaatcggtcgtgaaggacgtaacatccgtgcattcgaacaaatctgtggt
gtggatcttatcatcgacgatactccagaagttgttgttatctcttctttcaacgttgta
agaaaagaaatcgccagaatggttatccagaagcttattgccgatggacgtatccaccca
gctaaaatcgaagaatttcatgacaaatcaaaagctgaaatggaaagacagcttcgcgac
ctgggtgaaaaagctcagatggaaatcggagttcacggtatccaccctgaaatcctaaaa
cttgttggagctcttcagtggagaacttcatacactcaaaaccaatatcaacatgctatt
gaagctgcattcgtttgtggagctatggccgctgaacttggactaaacgtaaaacaggct
cgtcgtgcagctcttcttcacgatgtaggtaaagtaattgatgcttcagctgaaggatca
cacgcggttgttggtgctgacttcctgaagaaatatggagagtctccagatatcgttcac
gcagttcgcgctcaccacgatgatgaaaaaccagaatcagttcttgctcaccttgtagca
gcagcagatgctctctctggagctcgtccaggcgcacgtaaagcaatgatggaatcatac
gtatctcgcctaacggacattgaagaaatcgtaaacagcttcgaaggtgtttcgaagtca
tacgcaatctctggtggacgcgaagtaagagttttcgtagaaaacgatcgtgtaacagat
gaggaaacagtcatgctttctcgcgacatcgctaagaagatcgaagaagagatgtcatac
cctggaacaattaagatcacagtactaagagaaacaaaagcggtagggatcgcgaagtaa
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