Bacillus stercoris: QI003_00685
Help
Entry
QI003_00685 CDS
T09305
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bstr
Bacillus stercoris
Pathway
bstr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bstr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QI003_00685 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bstr03021
]
QI003_00685 (rpoC)
03400 DNA repair and recombination proteins [BR:
bstr03400
]
QI003_00685 (rpoC)
Enzymes [BR:
bstr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QI003_00685 (rpoC)
Transcription machinery [BR:
bstr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QI003_00685 (rpoC)
DNA repair and recombination proteins [BR:
bstr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QI003_00685 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
WGV95641
LinkDB
All DBs
Position
125423..129022
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNNFEYMNIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPANTPLEKKQLLSEKEYRAYLDKYGNKFQASMGAEAIHKLLQ
DIDLVKEVDMLKEELKTSQGQRRTRAIKRLEVLEAFRNSGNKPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPHLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERAGAVGEGMVFKNTDEALLAYQNGYVHLHTRVAVA
ANSLKNVTFTEEQRSKLLITTVGKLVFNEILPESFPYMNEPTKSNIEEKTPDRFFLEKGA
DVKAVIAQQPINAPFKKGILGKIIAEIFKRFHITETSKMLDRMKNLGFKYSTKAGITVGV
SDIVVLDDKQEILEEAQSKVDNVMKQFRRGLITEEERYERVISIWSAAKDVIQGKLMKSL
DELNPIYMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIRETDCGTDRGILAKPLKEGTETIERLE
ERLIGRFARKQVKHPETGEVLVNENELIDEDKALEIVEAGIEEVWIRSAFTCNTPHGVCK
RCYGRNLATGSDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQATITEIDGTVVEINEVRDKQQEIVVQGAVETRSYTAPYNSRLKVAEGDKITR
GQVLTEGSIDPKELLKVTDLTTVQEYLLHEVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
IDAGDTDVLPGTLLDIHQFTEANKKVLLEGNRPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMMKYRKVKPVSNVQPTDDMVPVE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtgaacaattttgagtatatgaacatcggtcttgcttcaccagataaaatc
cgttcatggtcttttggtgaagtgaaaaagcctgaaacgataaactatcgtacgttaaaa
cctgaaaaggacggtctattctgcgaacgcattttcggaccgactaaggactgggaatgt
cattgcgggaagtacaagcgagttcgttataaaggcgtagtttgtgaccgctgcggagtc
gaagtaacacgggctaaagtccgtcgtgagagaatggggcacattgaactggctgcccca
gtttcccacatttggtatttcaaaggtattccaagccgtatgggtcttgtgctggatatg
tcacctcgtgctttagaagaagtgatttactttgcttcttacgttgtaactgacccggca
aatacaccgcttgaaaagaaacagcttctgtctgagaaagaataccgtgcttatcttgat
aaatacggtaataaattccaagcatctatgggtgctgaagcaattcataaacttcttcaa
gatatcgatcttgtaaaagaagttgatatgttaaaagaagagctgaaaacttcacaagga
caacgacgtactcgtgcgatcaaacgtcttgaagttttagaggccttccgtaactcagga
aacaagccttcttggatgatccttgatgtgcttcctgttattcctccagagcttagaccg
atggttcagctagatggcggacgttttgcgacttctgatttgaacgatctttatcgtcgt
gtcatcaaccgtaacaatcgtttgaaacgccttctggaccttggtgcgcctagcatcatc
gttcaaaacgaaaagcgtatgcttcaagaggctgtcgatgccttaattgacaatggccgc
cgcggacgccctgtaacaggtcctggtaacagaccgttaaaatctctttctcacatgttg
aaagggaagcaaggccgtttccgtcaaaaccttcttggtaaacgtgttgattactccgga
cgttctgtaatcgttgttggtcctcatttgaaaatgtaccaatgcggattaccgaaggaa
atggcgcttgaactcttcaagcctttcgttatgaaagaacttgttgaaaagggtcttgca
cataacattaagagtgcgaaacgcaaaattgagcgcgtacagcctgaagtttgggatgta
ttagaatcagttattaaggagcacccagtactgctgaaccgtgcccctacacttcacaga
ttaggtattcaggcgtttgaaccaacgcttgttgaaggacgcgcaatccgccttcaccca
ctcgtatgtacagcttacaacgctgactttgacggtgaccaaatggcggttcacgtacca
ttatctgctgaagcacaagctgaagcacgcatcttgatgcttgctgctcaaaacatcttg
aatcctaaagatggtaaacctgttgtaacaccgtctcaggatatggtacttggtaactat
tacctgacacttgagcgtgccggtgctgtcggtgaaggcatggtcttcaagaatacagac
gaagcgcttcttgcttatcaaaacggatatgttcaccttcatacgagagtagctgttgca
gctaactcccttaagaatgtgacatttaccgaagaacagcgctcaaaattgttaattaca
actgtcggtaagcttgtcttcaatgaaattcttccggaatcattcccttacatgaatgaa
ccaacgaagagcaacattgaagagaaaacacctgaccgtttcttcttggaaaaaggtgct
gacgttaaagctgtcatcgcacagcagccaatcaatgcaccgttcaaaaaaggtattctg
ggtaaaatcatcgcggaaatctttaaacgattccatatcacggaaacgtctaaaatgctt
gaccgcatgaaaaacctaggcttcaaatattcaacaaaagctggtattacagttggggtt
tctgacatcgtcgtactcgatgataaacaagaaattcttgaagaagcgcaaagcaaagtt
gacaacgttatgaagcagttccgccgcggtcttatcactgaagaagaacgctatgagaga
gtcatctctatctggagtgctgcaaaagacgtgatccaaggcaaactgatgaaatcactt
gatgaactcaacccgatctacatgatgagtgactctggtgcccgtggtaacgcatctaac
tttacgcagcttgccggaatgcgcggtctgatggccaacccggctggacgtatcattgag
ttgccgatcaaatcaagtttccgtgaaggtctgacagtattggagtactttatctccaca
cacggagcgcgtaaaggtcttgccgataccgctcttaaaactgctgactcaggttacctt
acacgccgtctcgttgacgttgcgcaggatgttatcatccgtgaaactgattgcggaact
gaccgaggcattcttgctaagcctcttaaagaaggaactgaaacaattgagcgcttagaa
gaacgcttaatcggccgttttgcacgaaaacaagtgaagcaccctgaaacaggtgaagtg
cttgtgaatgaaaacgaactaatcgatgaagataaggcgctggagattgtcgaagctggc
attgaagaagtgtggatccgttctgccttcacatgtaatacgcctcatggtgtatgtaaa
cgatgctatggccgaaatcttgcaactggctccgatgttgaagtcggtgaagctgtcgga
atcattgctgcccaatcaatcggtgagcctggtacacagttaacaatgcgtacattccat
acaggcggggttgccggagacgatatcacacagggtcttccgcgtatccaagagcttttc
gaagcgcgtaatccgaaaggtcaggcaacaattacagaaatcgacggtacagtcgttgag
attaatgaagttcgtgataagcagcaggaaattgtcgttcaaggcgcagtggaaacacgt
tcttatacggcaccttacaactcccgcctgaaagtagcggaaggagataaaattactcga
ggccaagtactgacagaaggttcaatcgatccgaaagaacttcttaaagtgactgacctg
acgactgttcaagagtatcttctccatgaggttcaaaaggtttaccgtatgcagggtgtt
gaaatcggtgataaacacgtagaagtaatggttcgccagatgcttcgtaaagtacgcgta
attgatgccggcgacactgatgtgcttccaggtacattgcttgacatccaccaatttact
gaagcgaacaaaaaggtgttgctcgaaggcaatcgacctgctacaggccgtcctgtctta
ctcggtattacaaaagcatctcttgaaactgattcattcttatctgctgcttccttccag
gaaacaacgcgtgtccttacagatgcagcgatcaaaggtaagcgtgacgagcttctcggc
ttgaaagagaatgttatcatcggtaaacttgttccagctggtacaggaatgatgaaatac
cgtaaagtaaaaccagtatcaaatgttcagccgactgacgatatggttccggttgaataa
DBGET
integrated database retrieval system
