Bacillus stercoris: QI003_05760
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Entry
QI003_05760 CDS
T09305
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bstr
Bacillus stercoris
Brite
KEGG Orthology (KO) [BR:
bstr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bstr03400
]
QI003_05760 (sbcC)
DNA repair and recombination proteins [BR:
bstr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QI003_05760 (sbcC)
Archaeal homologous recombinant proteins
QI003_05760 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WGV96535
LinkDB
All DBs
Position
1153989..1157381
Genome browser
AA seq
1130 aa
AA seq
DB search
MKPIALSIKGLHSFREEQTIDFEGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVERAA
NNTHGILNHAEDTLSVSFTFALQSNHQISYKVERVFKRTDEMKVKTALCRFIEIKDEHTV
LADKASEVNKRVEELLGLTIDDFTRAVVLPQGKFAEFLSLKGAERRHMLQRLFHLEQYGD
RLVKKLRRQAQEANARKNEMLAEQSGLGEASSEAVEQAEKALEQAEIRLEAMRKSRDQAK
ERFTEHQEIWNVQKEQSAYEEEKKRLAEEQLHVDIMQKRLLEAETAAALKPYADRYAEAI
QHEAKAEKEQTLARKDLEDRNAFFQQKHEEYEAWRQHKSEKEPELLTKQEQLSRLQEIEM
KLSEAKQEEERKKAELRQKEEALQSVMSELETVTDRLTRGQNRQTELKQQLKSLQVTSDE
RRSCQQAAEMALHIRQTEEQIKKEKNRSDELSLVLQKMNEEKNTLVQRTEAEENNIIQAY
EAVQTVYHLVCEAEHSLTRMTEEARKNQHTLHLQREKARMALLTKELAQKLTAGKPCPVC
GSTDHDPSASVHETYEADSHLEEDIKRTDVLLTEAAALSQEILSAKITLEEQSARFMEQC
PFLQTSQAQNLEAAASFENQPVYEAFETAKFEWKRIKQDILSVKTRMAQMIGAYQESLKK
AEQVNEKIGFEKREADRIESIITELQTSLDSRLNMFKEAFQDQSVDEAEKWQQAIEEKDR
AAEECEKRIEKSIAFLAEHEAQKEKLRESGHRLEREKLELHYAAERIKSVIADYENELGD
YAKGDSIQVKLRSVQQDLKLLKEKEQFLYEELQSAQMKLNQAKSRASASELTLQEAKGRL
EKAKAAWLEHAKNTCFTRTEEVEQSLIPADELEKMKTGIDQFMDKLKQNAANLKRVAEIL
DGRAISESEWSETVAALQKAEDAFGAAIEEKGAAAKALAVIRDHHKRFKEIEAELKKWQT
HIDRLDKLQAVFKGNTFVEFLAEEQLESVARDASARLGMLTRQRYAIEVDSEGGFVMRDN
ANGGVRRPVSSLSGGETFLTSLSLALSLSAQIQLRGEYPLQFFFLDEGFGTLDQDLLDTV
VTALEKLQSDNLAVGVISHVQELRARLPKKLIVHPAEPSGRGTRVSLELM
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatcgccttaagcattaaggggctccacagctttagagaggagcagacgata
gattttgaaggtctttccggtgctggtgttttcggcattttcggcccgacaggaagcggc
aaatcctcgattctcgacgcaatgacgcttgctttatacggaaaggtggaacgggcggca
aataatacccacggaatcttaaatcacgccgaagatacgctgtctgtttcctttaccttt
gcgcttcagtcgaatcatcaaatctcatacaaagttgagcgtgtgtttaagagaacggat
gaaatgaaggtgaaaacggcactttgccgcttcatcgaaatcaaggatgagcatacggtg
ctggctgataaagccagcgaagtgaataaaagagtggaggagctcttggggctgacgatc
gacgactttacgagagcggtggtgctgccgcaagggaaatttgctgagtttctgtcttta
aaaggggcagagcgcaggcatatgcttcagcgtttatttcatttggagcaatacggagac
aggcttgtgaaaaaactgaggcggcaggcacaggaagccaacgcgagaaaaaatgaaatg
ctcgctgagcagtccggtctcggtgaggcgagttcagaggcagttgagcaagcggaaaag
gctctcgaacaagccgaaatcaggctggaagcgatgaggaagagccgtgatcaggcgaaa
gagcgatttacggagcatcaggagatttggaatgtccaaaaggaacaatccgcttatgaa
gaagagaaaaaacgtctcgcggaagaacagctgcatgtagacattatgcaaaaacgcctg
ctggaagcagaaacagccgccgctcttaagccctatgcggaccgatacgcagaagcgatc
cagcatgaagcgaaagctgaaaaggaacaaacgctagcccgcaaggatttagaagaccgg
aatgctttctttcagcaaaaacatgaagagtatgaagcgtggcgccagcataaaagcgag
aaagagcctgagcttttaactaagcaggaacagctttcccgtttgcaggaaatcgaaatg
aaactgagtgaggccaagcaagaggaagagcgcaaaaaggctgaactccggcagaaagaa
gaggctcttcaatctgtcatgagtgaattggagacggtaacagaccgcctgacacgaggg
caaaacagacagacggaattgaagcagcagctcaaatccctgcaggtgacatccgatgag
cgaagaagctgccagcaggccgcagaaatggcattgcacatcaggcaaactgaagagcaa
atcaaaaaagagaaaaatcgaagtgacgaattgagcctcgtgctgcagaagatgaatgaa
gagaagaatacacttgttcaaagaacggaagcggaagaaaacaacatcattcaggcatat
gaggctgtgcaaaccgtgtaccatttggtgtgcgaggcggaacactcattaacacgtatg
actgaagaggctagaaagaatcaacatacgcttcacctacagcgtgaaaaagcaaggatg
gcactcctgacaaaagagttagcgcaaaaactgaccgctggaaagccttgcccggtctgc
ggttcaaccgatcacgatccatccgcgtcagtacatgaaacatatgaagccgacagccat
cttgaagaggacatcaaacggacagatgtgttattgacggaggcagcagctctcagccaa
gagattctttcagccaaaattacgcttgaagaacagtccgcgcgctttatggaacagtgt
ccgtttttgcagaccagtcaagcgcagaaccttgaagcggcggcttccttcgagaatcag
ccggtgtatgaagcatttgaaactgccaaatttgaatggaaacgaatcaagcaggacatt
ctttctgttaaaacacggatggcacaaatgatcggcgcctatcaggagtctttaaaaaag
gccgagcaggttaatgaaaaaatcggttttgaaaaaagagaggctgaccgtattgaaagc
atcatcaccgagcttcaaacctcattggacagccgtctgaacatgttcaaagaagcattt
caggatcaatctgtggacgaagcagaaaaatggcagcaagccattgaagaaaaggaccgg
gctgcagaagaatgtgaaaaacgaattgagaagagtatcgcgtttcttgctgagcatgaa
gcacaaaaggaaaaactgcgggaatcggggcatcggcttgaacgggaaaaactggagctt
cattatgccgctgaacgcatcaagagcgtgatagctgattatgagaacgaacttggagat
tatgcaaaaggagattccattcaagtcaaactccgctctgtccagcaggatctaaagctg
ttaaaggaaaaagaacaatttttatatgaagaactgcaaagcgcccaaatgaagctcaat
caggcgaaaagccgcgcttcggcaagcgagctcactcttcaagaggcgaaggggagattg
gaaaaagcaaaagctgcttggcttgagcatgccaaaaacacctgctttacccggactgag
gaggttgaacaaagtctcatcccagccgatgaacttgaaaagatgaaaaccggcatagac
cagtttatggataaactgaagcaaaatgctgcaaacttaaaacgagtagcagagatactt
gacggcagagcgatatcagagagcgaatggagcgaaaccgttgcagcattacaaaaagct
gaggacgcatttggcgctgctatagaggaaaaaggcgcggctgcgaaagcactggccgtc
attcgcgaccatcataaacgatttaaagaaattgaagcggaactaaaaaagtggcagacg
catatcgacaggctggacaagctgcaagctgtgtttaaaggcaataccttcgtcgaattt
ttagctgaggagcagcttgaaagcgttgcgagggacgcctcagcaagactcggtatgctg
acgagacagcgctatgccatcgaagtagattctgagggcggctttgtgatgcgggataat
gcgaacggaggcgtaagacgcccggtatccagtttgtctggaggagaaaccttcctcact
tcgctatcactcgctctttcgctgtctgcccagatccagcttcgcggagaatacccgctc
cagttctttttcttagatgaaggattcggcacactggatcaagatctgcttgatacggtt
gtaacggccttggaaaaacttcagtcagacaatctggctgtcggtgtcatcagccatgtg
caggaactgcgtgcacggcttccgaaaaaactgatcgtccatccggctgaaccgagcggc
cgcggtacacgggtatcacttgagttgatgtaa
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