Bacillus stercoris: QI003_12265
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Entry
QI003_12265 CDS
T09305
Symbol
sigD
Name
(GenBank) RNA polymerase sigma-28 factor SigD
KO
K02405
RNA polymerase sigma factor FliA
Organism
bstr
Bacillus stercoris
Pathway
bstr02020
Two-component system
bstr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bstr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QI003_12265 (sigD)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QI003_12265 (sigD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bstr03021
]
QI003_12265 (sigD)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bstr02035
]
QI003_12265 (sigD)
Transcription machinery [BR:
bstr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QI003_12265 (sigD)
Bacterial motility proteins [BR:
bstr02035
]
Flagellar system
Flagellar assembly proteins
Stator
QI003_12265 (sigD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
IF2_N
UPF0175
DUF7096
Motif
Other DBs
NCBI-ProteinID:
WGV93350
LinkDB
All DBs
Position
2437420..2438184
Genome browser
AA seq
254 aa
AA seq
DB search
MQSLNYEDQVLWTRWKEWKDPKAGDDLMRRYMPLVTYHVGRISVGLPKSVHKDDLMSLGM
LGLYDALEKFDPSRDLKFDTYASFRIRGAIIDGLRKEDWLPRTSREKTKKVEAAIEKLEQ
RYLRNVSPAEIAEELGMTVQDVVSTMNEGFFANLLSIDEKLHDQDDGENIQVMIRDDKNV
PPEEKIMKDELIAQLAEKIHELSEKEQLVVSLFYKEELTLTEIGQVLNLSTSRISQIHSK
ALFKLKNLLEKVIQ
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccttgaattatgaagatcaggtgctttggacgcgctggaaagagtggaaagat
cctaaagccggtgacgacttaatgcgccgttacatgccgcttgtcacatatcatgtaggc
agaatttctgtcggactgccgaaatcagtgcataaagacgatctaatgagccttggtatg
cttggtttatatgatgcccttgaaaaatttgaccccagccgggacttaaaatttgatacc
tacgcctcgtttagaattcgcggcgcaatcatagacgggcttcgtaaagaagattggctg
cccagaacctcacgcgaaaaaacaaagaaggttgaagcagcaattgaaaagcttgaacag
cgttatcttcggaatgtatcgcccgcggaaattgcagaggaactcggaatgacggtacag
gatgtagtgtcaacaatgaatgaaggtttttttgcaaatctgctgtcaattgatgaaaag
ctccatgatcaagatgacggggaaaacattcaagtcatgatcagagatgacaaaaatgtt
ccgcctgaagaaaagattatgaaggatgaactgattgcacagcttgctgaaaaaattcac
gaactctctgaaaaagaacagctggttgtcagtttgttctacaaagaagagctgacactg
acagaaatcggacaagtattaaatctttctacgtcccgcatatcacagatccattcaaag
gcattatttaaactaaagaatctgctggaaaaagtgattcaataa
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