Bacillus stercoris: QI003_16895
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Entry
QI003_16895 CDS
T09305
Symbol
recDB
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bstr
Bacillus stercoris
Pathway
bstr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bstr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QI003_16895 (recDB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bstr03400
]
QI003_16895 (recDB)
Enzymes [BR:
bstr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QI003_16895 (recDB)
DNA repair and recombination proteins [BR:
bstr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QI003_16895 (recDB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
HHH_5
UvrD-helicase
AAA_16
UvrD_C
AAA_12
T2SSE
nSTAND3
AAA
NPHP3_N
TsaE
DEAD
NTPase_1
AAA_28
Rad17
AAA_17
Zeta_toxin
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WGV94179
LinkDB
All DBs
Position
complement(3357095..3359491)
Genome browser
AA seq
798 aa
AA seq
DB search
MQQHPDQLKLEEEPYLKGTVNTVIYHNDTNLYTVLKVKVTETSEAIEDKAVSVTGYFPAL
QEEETYTFYGKIVTHPKFGLQFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVK
KLGDSAINKILADASVLYDVPRLSKKKADTLAGALQRHQGLEQIMISLNQFGFGPQLSMK
IYQAYESETLEKIQENPYQLVKDVEGIGFGKADELGGRMGLSGNHPERVKAAILYTLEMT
CLSEGHTYIETEQLIIDTQSLLNQSAKEDQRITEMDAANAIIALGENKDIVIEDGRCYFP
SLFYAEQNVAKRVKHIASQTEYDDQFPESEFLLALGELEERMNVQYAPSQKEAIQKALSS
PMLLLTGGPGTGKTTVIRGIVELYGELHGVSLDPSAYKKDEAFPIVLAAPTGRAAKRMSE
STGLPAVTIHRLLGWNGAEGFSHTEDEPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHQMKNGLLPNNL
TAPTKDRSFIRCGGSQIKEVVEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQD
ILNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEITSIFYAKENTEKEDMA
VVSFDGNEMTFTKKDFNQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSVQVEEMDAELEALQKELPFSVHDA
NIGMEGITPFDFMKEEQL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcagcatccggatcagcttaaactggaggaagagccctatttaaaagggacagtt
aacacagtcatctatcataatgacaccaatttatatacggttctgaaagtgaaagtcaca
gagacctccgaagccatagaagataaagccgtatccgtgacgggctacttccctgcgctt
caagaagaagagacctacacgttttacggaaagatcgtaacacacccgaaattcgggctc
caatttcaagcggagcatttcaaaaaagagataccgacgactaaggaaggcatcatacaa
tatttatcgagtgatttattcgagggaatcggcaaaaaaacagctgaagaaattgtgaaa
aagctgggcgacagcgccattaacaaaatattggctgacgcttcagtgctttatgatgtt
ccgaggctctcaaaaaagaaagcagacacgctggccggtgccttgcagcggcatcagggg
ctggagcaaatcatgatttccctgaaccagtttggttttggtccgcagctgtccatgaaa
atctatcaagcctatgaatccgagacgcttgaaaagattcaagaaaatccttatcagctt
gtgaaggacgtagaaggcatcgggtttggaaaagcggatgagctgggcggcagaatgggt
ctttcgggtaaccatcctgagcgggtaaaagctgcgattctgtacacgcttgaaatgact
tgtctgtcagaggggcacacgtacatagaaacggagcagctgatcatcgatacccaatca
ctgttaaaccagtcagcaaaggaagatcagcgcatcacagaaatggatgccgctaacgcg
attattgctcttggagaaaataaagacattgtcatagaagatggacgctgttattttcca
tcgctgttttacgcagaacaaaacgttgctaagcgagtgaaacatatcgcaagccaaact
gaatatgatgaccagtttcccgaatcagaatttctgctcgctttgggggaattggaagaa
cggatgaacgttcagtatgcccccagccagaaggaagcgattcaaaaagccctttcctcg
ccgatgcttcttttaacaggcggcccaggaacagggaaaacgacagttatcagagggatt
gtcgagctctacggagagcttcacggtgtgtcactagacccgtcagcttataaaaaggat
gaagcttttccgattgttttggccgctccgacagggagagcagcaaaacgaatgagtgaa
tcaacgggacttcctgcagtcacgatacacaggctgcttggctggaacggcgctgaaggc
ttttcccatacagaggatgagccgattgaagggaagctgttaataatcgatgaagccagc
atgcttgatatatggctggcgaaccatctattcaaggcgatccctgatcatatacaaatc
atcattgtcggagacgaagaccagttgccttctgtaggtccgggccaagtgctgagagac
ctactggcatcccaggtgattcccacggtgagactgacagacatctaccgccaggctgag
gggtcatcaatcgtcgagcttgcccaccagatgaaaaatggattgctgccgaacaatttg
actgcccccacaaaggaccgatcctttattcgctgcggaggctcgcaaattaaagaagtt
gttgaaaaagttgtcgccaatgcattgaaaaaaggctatacggcaaaggacattcaggtc
ctcgctccgatgtacagaggaaaagccggcatcaatgagttgaatgtgatgctgcaggac
attttaaatcctcctaaagaaaaacggagagaattgaagttcggggatgttgtctacaga
accggagataaaattttgcagcttgtcaatcagccggaaaacaatgtattcaacggagat
attggcgaaattacgtcgatattttatgcaaaggaaaatacagaaaaagaagacatggcc
gtcgtttcttttgatggcaatgaaatgacgtttacgaaaaaagattttaatcaatttacc
catgcgtattgctgttctattcataaatcgcagggaagtgaatttccgattgtggttttg
cctgttgtgaaaggctactatagaatgctcagaagaaaccttctttataccgcgattaca
agagcgaagaaatttctcattttatgcggggaagaggaggcgctggagtggggcgtgaaa
aataatgatgcaactgtcagacagacctccttaaaaaacaggctgtccgtacaggttgag
gaaatggatgccgagcttgaggctctccaaaaagagctcccattcagcgtacacgacgcc
aacattggcatggaaggcattacaccatttgattttatgaaagaagaacagctgtaa
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