Bacillus stercoris: QI003_16970
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Entry
QI003_16970 CDS
T09305
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bstr
Bacillus stercoris
Pathway
bstr03410
Base excision repair
bstr03430
Mismatch repair
bstr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bstr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QI003_16970 (recJ)
03430 Mismatch repair
QI003_16970 (recJ)
03440 Homologous recombination
QI003_16970 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bstr03400
]
QI003_16970 (recJ)
DNA repair and recombination proteins [BR:
bstr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QI003_16970 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QI003_16970 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QI003_16970 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
tRNA_anti-codon
PGM_PMM_II
Motif
Other DBs
NCBI-ProteinID:
WGV94192
LinkDB
All DBs
Position
complement(3374226..3376586)
Genome browser
AA seq
786 aa
AA seq
DB search
MLASKMRWEIQRPDQDKVKSLTEQLHITPLVASLLVKRGFDTAESARLFLHTKDADFYDP
FEMKGMKEAADRIKQAISQQEQIMIYGDYDADGVTSTSVMLHTLQKLSAQVDFYIPDRFK
EGYGPNEQAFRSIKERGFSLIITVDTGIAAVHEAKVAKELGLDVIITDHHEPGPELPDVH
AIVHPKQPGCTYPFKELAGVGVAFKLAHALLGELPDELLDLAAIGTIADLVPLHDENRLI
ATLGLERLRRTNRLGLKELIKLSGGDIGEANEETVGFQLAPRLNAVGRIEQADPAVHLLM
SEDSFEAEELAAEIDQLNKERQKMVSKMTDEAIEMVERQGLDQTAIVVAKAGWNPGVVGI
VASKLVDRFYRPAIVLGINEEKGIAKGSARSIRGFNLFESLSECRDILPHFGGHPMAAGM
TLKAEDVSDLRSRLNEIADNTLTEEDFVPVQEVDLVCSVEDITVESITEMNMLSPFGMLN
PKPHVLVENAVLEDVRKIGANKTHVKMTIKNESSQLDCVGFNKGELEEGIVPGSRISIVG
EMSINEWNNRKKPQLMIKDAAVSEWQLFDLRGKRTWEDTVSALPSAKRAIVSFKEDSTTL
LQTEGLRQEVQVISSEDQAKAFDLDGAYIVLLDPPPSLDMLARLLEGKAPERIYFIFLNH
EDHFLSTFPARDHFKWYYAFLLKRGAFDVKKHGSELAKHKGWPVETINFMTKVFFDLGFV
KIENGVLSVVSGAKKRDLTDSQTYQVKQQLMELDQKLNYSSAEELKEWLNKLMKQDSEAY
ESTRRT
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgtcaaaaatgcgatgggaaatccagcgaccagatcaggataaggtcaaatca
ctcacagaacaattgcatataacacctcttgttgcgtccctgcttgtaaaaagaggcttt
gatacggcagaaagcgctaggctgtttttacatacaaaggatgccgatttttatgatcct
tttgaaatgaaaggcatgaaagaagcggcagatcgaataaaacaggcgatttcacaacaa
gaacagattatgatatatggcgattatgacgccgatggggttaccagtacgtcagtgatg
cttcacacgctgcaaaaactatcggctcaagttgatttttatatacctgaccgttttaaa
gaaggctatggacctaatgaacaggcgtttcgttcgattaaagaacggggcttctctttg
atcattacggttgatacaggaattgccgctgtgcatgaagcgaaggtggcgaaagaactc
gggctggatgtcatcattacagatcatcatgaaccgggaccggagcttccggatgtccat
gcgatcgtccacccgaagcagccgggctgcacttacccgtttaaagagcttgcaggggtc
ggagtcgcgtttaagctagcccatgctttattgggtgaacttccggatgaactgcttgac
ctggcggcaatcggcaccattgctgatcttgtcccgctgcatgacgaaaacagattaatt
gcaacactaggacttgaaaggcttcgacggacaaatcggctcggcttaaaagagctgatt
aagctgtcaggcggagacatcggagaagcgaacgaagaaacagtcggatttcagctcgca
ccaaggctgaatgccgtcggaagaatcgaacaggcggatcccgctgttcatttgcttatg
tcagaggattcgtttgaagcggaagagcttgccgcagaaattgaccagctgaacaaagag
cgccaaaaaatggtcagtaaaatgacggatgaagcgattgaaatggttgaacggcaaggg
ctcgatcaaactgcaattgtcgtggcaaaagccggatggaacccgggagtcgtcgggatt
gtggcctcaaagcttgtggaccgtttctatcgccctgctattgtgcttggcattaatgaa
gaaaaggggatcgctaaaggttcggcccgaagcatcaggggatttaatttatttgagagc
ctttctgaatgcagggatattcttcctcatttcggcggccatccaatggcggcggggatg
acgctgaaagccgaagatgtgtcggatttgcgaagcaggctgaatgaaatagcggacaat
acgcttacggaagaggattttgttcctgtacaggaagtcgaccttgtctgcagcgtcgag
gacattacagttgaaagcatcacagaaatgaacatgctttctccttttggcatgctgaac
ccgaaaccgcacgttctcgtagaaaacgcagtactggaagatgtccgcaagataggggca
aataaaactcatgtcaaaatgacgattaaaaatgagtcgtctcagcttgattgcgtcggt
tttaataaaggcgagctcgaagaaggcatcgtaccgggatcaagaatttccattgtcggt
gagatgtcaatcaacgaatggaacaatcggaaaaaaccgcagcttatgataaaggatgcc
gctgtttctgaatggcagctgtttgatttaaggggaaaacggacgtgggaagatacagtt
tccgcccttccatctgctaaacgggccattgtctctttcaaagaagactcaacaacactt
cttcaaactgaaggccttcgtcaagaagtgcaggtcatcagctcagaagatcaagcaaag
gcgtttgacctcgatggtgcatatattgtattgctggatccgccgccttcgttggacatg
ctcgcacgtttgctggaaggaaaggcgcctgagcggatatattttatttttctcaatcat
gaggaccactttttatcgacttttcccgcaagagaccactttaaatggtattatgcgttc
ttgctgaaaagaggcgcttttgatgtgaaaaaacacggttcagagcttgcaaaacataaa
ggctggcccgttgaaacaatcaatttcatgacaaaggtgttttttgatctcggttttgtt
aaaatagagaatggtgtgctgtctgttgtgagcggagcaaagaaacgcgacttaacagac
tcacaaacatatcaggtgaaacagcagctgatggaactggatcaaaagctgaattattct
tctgctgaagagctgaaggaatggctgaataagctgatgaaacaagattcagaggcttat
gaaagtacgaggaggacataa
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