Bacillus stercoris: QI003_17805
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Entry
QI003_17805 CDS
T09305
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bstr
Bacillus stercoris
Pathway
bstr03030
DNA replication
bstr03430
Mismatch repair
bstr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bstr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QI003_17805 (dnaE)
03430 Mismatch repair
QI003_17805 (dnaE)
03440 Homologous recombination
QI003_17805 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bstr03032
]
QI003_17805 (dnaE)
03400 DNA repair and recombination proteins [BR:
bstr03400
]
QI003_17805 (dnaE)
Enzymes [BR:
bstr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QI003_17805 (dnaE)
DNA replication proteins [BR:
bstr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QI003_17805 (dnaE)
DNA repair and recombination proteins [BR:
bstr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QI003_17805 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
WGV94350
LinkDB
All DBs
Position
complement(3543408..3546755)
Genome browser
AA seq
1115 aa
AA seq
DB search
MSFVHLQVHSGYSLLNSAAAVEELVSEADRLGYASLALTDDHVMYGAIQFYKACKARGIN
PIIGLTASVFTDDSELEAYPLVLLAKSNTGYQNLLKISSVLQSKSKGGLKPKWLHSYREG
IIAITPGEKGYIETLLEGGLFEQAAQASLEFQSIFGKGAFYFSYQPFKGNQILSEQILKL
SEETGIPVTATGDVHYIRKEDKAAYRCLKAIKAGEKLTDAPAEVLPDLDLKPIEEMQNIY
REHPEALQASVEIAEQCRVDVSLGQTRLPSFPTADGTSADDYLTDICMEGLRSRFGTPDE
RYLRRLQYELDVIKRMKFSDYFLIVWDFMKHAHEKGIVTGPGRGSAAGSLVAYVLYITDV
DPIKHHLLFERFLNPERISMPDIDIDFPDTRRDEVIQYVQQKYGAMHVAQIITFGTLAAK
AALRDVGRVFGVSPKEADQLAKLIPSRPGMTLDEARQQSPQLDKRLRESSLLQQVYTIAR
KIEGLPRHASTHAAGVVLSEEPLTDVVPLQEGHEGIYLTQYAMDHLEDLGLLKMDFLGLR
NLTLIESITSMIEKEEKIKIDLSSISYSDDKTFSLLSKGDTTGIFQLESAGMRSVLKRLK
PSGLEDIVAVNALYRPGPMENIPLFIDRKHGRAPVHYPHEDLRSILEDTYGVIVYQEQIM
MIASRMAGFSLGEADLLRRAVSKKKKEILDRERSHFVEGCLKKEYSVDTANEVYDLIVKF
ANYGFNRSHAVAYSMIGCQLAYLKAHYPLYFMCGLLTSVIGNEDKISQYLYEAKGSGIRI
LPPSVNKSSFPFTVEDGSVRYSLRAIKSVGVSAVKDIYKARKEKPFEDLFDFCFRVPSKS
VNRKVLEALIFSGAMDEFGQNRATLLASIDVALEHAELFAADDDQMGLFLEESFSIKPKY
VETEELPLVDLLAFEKETLGIYFSNHPLSAFRKQLAAHGAVSILQAQRTVKRQLSLGVLL
SKIKTIRTKTGQNMAFLTLSDETGEMEAVVFPEQFRQLSPVLREGALLFTAGKCEVRQDK
IQFIMSRAELLENMDAEKAPSVYIKIESSQHSQEILAKIKRILLEHKGETGVYLYYERQK
QTIKLPESFHINADHQVLYRLKELLGQKNVVLKQW
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgttcacctgcaagtacatagcgggtacagcctgctaaacagcgccgcggct
gtggaagagctcgtcagtgaagctgacaggctcggatatgcgtctttggcgctgacagat
gatcatgtcatgtacggagctattcaattttataaagcttgcaaggcgagagggattaac
ccgataatcggtttgacggcttctgtttttacagatgacagcgagctcgaagcctacccg
ctcgtcctgctggcaaaatcaaatacaggctatcaaaacctgctgaaaatcagcagcgtt
ctgcaatctaaatcaaaaggcgggctgaagccgaaatggcttcacagttatcgagaaggc
attatcgcaataacgcccggcgaaaaaggatatattgagacgcttcttgaaggaggcctg
ttcgaacaggccgctcaagcttcgctggagtttcagtctatattcggaaagggagccttt
tatttctcctatcagccttttaaagggaatcaaatcttgtctgaacagattctaaagctg
tcagaagaaacgggtatccctgttacggccacaggcgacgtgcactacataaggaaggaa
gataaggctgcctaccgttgtctgaaagcgattaaagcgggggaaaagctgacggatgca
cctgctgaagttctgcctgatctcgatttgaaaccaattgaagaaatgcaaaacatttat
cgagagcatccagaggcattgcaagcttctgtggagatcgcggaacaatgccgggttgac
gtcagcctcggacagacccgtctgccgtcttttccgaccgcagacggaacgtccgctgat
gattatttaacggatatctgtatggagggactccgcagccgtttcggcacgcctgatgaa
cgataccttcgccgacttcaatatgagcttgatgtcatcaagcggatgaagttcagcgat
tactttctgatcgtgtgggattttatgaagcacgcccatgaaaaaggaattgttacaggg
ccgggacggggttctgcggctggctctcttgtggcatatgtgctgtatatcacagatgtt
gacccgattaagcatcaccttctgtttgagagatttttaaatcctgaacgcatcagcatg
ccggatattgatattgattttcccgatacaagaagggatgaagtcattcaatatgttcag
cagaaatacggtgcgatgcacgtcgcacagattatcacctttggaacacttgcggcaaag
gcggcgcttcgggacgtcggcagagtatttggcgtcagcccgaaggaggcagatcagctt
gcaaaacttattccttcaagaccgggcatgacgctggatgaagcgagacagcagtccccg
cagctggataagcggcttcgggagtcaagcctgcttcagcaagtctatacaattgcccga
aaaatagaagggctgccaaggcatgcatccacccacgcagcaggcgttgtcctgagtgaa
gaaccgttaacagatgttgttccgcttcaggaagggcatgaagggatctatttaacgcaa
tatgcgatggatcatcttgaagacttgggccttttaaaaatggatttcttaggcttgagg
aatctgacgctgattgaatccatcacttcaatgattgaaaaagaagaaaaaatcaaaata
gatctttcaagtatttcctacagcgatgataaaacgttctccttgctgtccaaaggggat
acgacagggattttccagctcgaatctgcagggatgagaagcgtcctgaagcggctaaaa
ccttcaggcctcgaggatattgtggcggtcaatgcgctgtaccggcccggtccgatggaa
aatattccgttatttattgaccgtaaacacggacgggcgcctgtccattatcctcatgag
gatttaaggagcattttggaagatacatatggcgttatagtgtatcaggaacaaattatg
atgattgcttcccgcatggcggggttttctttaggcgaagcagacctattgagaagggcg
gtcagcaaaaagaaaaaagaaatcttagacagagagcgaagccattttgttgaagggtgc
ttaaaaaaggagtattctgtagacactgcaaatgaagtctacgatttaatcgtcaaattc
gcaaattatggctttaaccgaagccatgcggtggcatacagcatgatcgggtgccagctt
gcgtatttgaaagctcattatccgttatattttatgtgcggattgctgacaagcgtcatt
ggcaatgaggataaaatttctcaatatctttacgaagcaaaggggagcgggattcgtatc
cttcctccgtcagtgaataaaagcagttttccgtttacagttgaagacggatctgtcagg
tacagcctccgcgcgataaaaagtgtaggcgtctcagcagtcaaagatatatataaagca
aggaaagagaaaccatttgaagatctttttgatttctgctttcgcgtgccgtcaaaaagc
gtaaatcgcaaagtgcttgaagcacttattttttctggtgcgatggacgaattcggccaa
aaccgggccacgctgctcgcatccattgatgttgctttggaacatgctgagctattcgcc
gcggacgatgaccaaatgggattgtttttagaggaatcgttttcaattaagccgaagtat
gtggaaacggaagagcttccgctagtggatttacttgcatttgaaaaggaaacgctcggc
atttatttttcaaatcatccgctctccgccttccgaaaacagctcgctgcgcacggagca
gtctccattctgcaggctcagcggacagtcaaaaggcagctttcgctaggcgttttgctg
tcgaaaatcaaaacgattcggacgaaaacaggtcaaaacatggcgtttttaacgctcagt
gatgaaaccggcgagatggaagccgtagtcttccctgaacaattcagacagctttcaccc
gttttaagagaaggcgctcttttgttcacagcggggaaatgcgaagtaagacaagataag
atccaattcatcatgtcccgggcagaattattagaaaatatggatgcagaaaaagcgcca
tcggtttatataaaaatagaaagcagtcagcacagccaggagatcctggcgaagattaag
cgcattttgctggagcataaaggggaaacaggcgtttatctctattatgaaaggcagaaa
cagacgattaagcttcctgagtcgtttcatatcaatgcggatcaccaggtgttatatcgc
ttaaaagagctgttgggtcaaaaaaacgtcgttttaaaacagtggtaa
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