Bacillus stercoris: QI003_19110
Help
Entry
QI003_19110 CDS
T09305
Symbol
pbpD
Name
(GenBank) transglycosylase domain-containing protein
KO
K18770
penicillin-binding protein 4 [EC:
2.4.99.28
3.4.16.4
]
Organism
bstr
Bacillus stercoris
Pathway
bstr00550
Peptidoglycan biosynthesis
bstr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bstr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QI003_19110 (pbpD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bstr01003
]
QI003_19110 (pbpD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bstr01011
]
QI003_19110 (pbpD)
Enzymes [BR:
bstr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
QI003_19110 (pbpD)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
QI003_19110 (pbpD)
Glycosyltransferases [BR:
bstr01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
QI003_19110 (pbpD)
Peptidoglycan biosynthesis and degradation proteins [BR:
bstr01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
QI003_19110 (pbpD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
DUF5059
Motif
Other DBs
NCBI-ProteinID:
WGV94579
LinkDB
All DBs
Position
3787793..3789667
Genome browser
AA seq
624 aa
AA seq
DB search
MTMLRKIIGWILLLCIIPLFAFTVIASGKEVKQMKSLDQVLDKNINLKDISLVQNSYMYD
RDGSLVSEIVSDHENRVLVPFDKIPEEVKQIFLTSEDKHFYEHKGFDFMGMVRATASNVK
DKKIDQGASTITQQLSRNLYLSHERSFSRKLTELAYSYQLEKKYTKNEILEAYLNTIYFN
NGVYGVGSAAQFYFSKPLKSLTVGEMAFICAIPNNPTLYDPLKHFDYTKSRQERLLKGLK
DAGVITDKELKKAVKQKIKLDVEKREDKYPDYVSYVNDEFTQLVSESEGFDKRLQKASGK
QKEKIENELSARVSTLMKDGVKIYTALNPYMQNQVVAQMNSKLPYAGVQGGAAVINHQTH
QIIALSGGKNYQKYDFNRAYQAYRQPGSSIKPLLDYGPYIEQTGATASSTIDASKFCSKD
YCPQNYNNRTYGTVTLDTAFKNSYNTPAIRMLDRVGIQKAFSYIEPYHFAKLVNSDYLLP
AALGGFTNGMTPLEMTKAYTTFGNSGSYTPSHAITKVTDLKGKTLYKWNDKATQIFSVRT
NMQLKKLMSSVVKSGTGKKAYFNAPYIGGKTGTSNDYHDMWFVGLTDTYTMGVWVGKDTP
TSVEYLHSISPQLSIWKGTLQAAY
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatgttacgaaaaataatcggatggattttgctcctttgcataatcccattgttt
gcatttacagttatcgcttccggaaaagaagtcaaacaaatgaagtccctggatcaggtg
cttgataaaaatattaatctgaaagatatcagccttgttcagaacagctacatgtatgac
agggacggctcccttgtctcggaaatcgtcagcgaccacgaaaaccgcgtgctcgttcca
tttgacaagattcccgaggaagtcaaacagattttcttaacatctgaggacaaacatttt
tacgagcataaaggctttgactttatgggaatggtgcgggcaactgcttctaacgtaaaa
gacaagaaaattgaccagggcgccagcaccatcacacagcagctttcaagaaacttgtat
ttgagccacgaacgctccttcagccgtaagctgacagagctcgcgtattcctatcagctt
gagaaaaagtatacgaaaaatgaaattcttgaagcttacttaaatactatttatttcaac
aatggtgtttacggcgtcggttcagcggctcaattctatttcagcaaaccgttgaaatct
ctcacagtgggagaaatggcttttatctgtgctatacctaataaccctacattatatgat
cctctcaagcattttgactacacgaaaagccgtcaagaacgtttgcttaaagggctaaaa
gatgccggggtcattacagacaaagaactaaaaaaagccgtcaaacaaaaaatcaaactg
gatgttgaaaaaagagaagacaaatatcctgactacgtttcctacgttaacgatgaattc
actcagctggtgtctgaatcagaaggctttgataaacgccttcagaaagcgtcaggaaaa
caaaaagaaaaaatcgagaatgagctgtccgcaagagtcagcactctgatgaaagacggc
gtgaaaatttatactgcacttaatccgtacatgcaaaatcaagttgtggcacaaatgaat
tctaagctcccgtatgcgggcgtgcagggcggagcggctgtgattaatcaccagacgcat
caaatcattgctctgtccggcgggaaaaactatcaaaaatatgattttaaccgtgcctac
caggcatacagacagccgggttcatccattaagccgcttcttgattacggcccttatatt
gaacagaccggagcgacagcaagcagcaccattgatgccagcaagttttgcagcaaagat
tactgtccgcaaaactacaataaccgcacgtacggcacagtgacgcttgatacggcgttt
aaaaattcttataatacaccggccattagaatgctcgaccgcgtcggcatccaaaaggca
ttcagttatattgagccgtatcattttgccaaacttgtcaacagcgattatcttcttcca
gcggcgcttggcggatttacaaacggcatgacgcctcttgagatgacaaaggcttatacg
acatttggcaacagcggaagctatacgccgagccatgcgattacaaaggtgacagacctt
aaaggaaaaacgctttataaatggaatgataaagcgactcaaatattcagcgtacgcacg
aacatgcagctgaaaaaactgatgtcttccgttgtgaaaagcggaacagggaaaaaagca
tatttcaatgcgccttacatcggcggtaaaaccggtacatcaaatgattatcacgatatg
tggtttgtcggcctgacagatacgtatacaatgggggtttgggtcggaaaggatacaccg
accagcgttgaatatcttcacagcatcagccctcagctttccatctggaaaggaacgctg
caagctgcttattaa
DBGET
integrated database retrieval system
