Bacillus stercoris: QI003_20570
Help
Entry
QI003_20570 CDS
T09305
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bstr
Bacillus stercoris
Pathway
bstr02020
Two-component system
bstr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bstr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QI003_20570 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QI003_20570 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bstr03021
]
QI003_20570 (rpoN)
Transcription machinery [BR:
bstr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QI003_20570 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
MarR_2
HTH_17
DUF1425
HTH_23
MarR
HTH_IclR
Sigma70_r4
HTH_Crp_2
HTH_11
DUF1631
HTH_21
HTH_38
Motif
Other DBs
NCBI-ProteinID:
WGV94855
LinkDB
All DBs
Position
complement(4076055..4077365)
Genome browser
AA seq
436 aa
AA seq
DB search
MDMKLQQVQVLKPQLTQELRQAITLLGYHSAELAEYIDELSLENPLIERKETDTPPLSYH
KTNKNRMNAQEAGLQLSDPQKTLQDALKQQSLDMNLSNTEKKIFNYLIYSLDSNGYLEED
VEEAAQRLSVSANETEAVLAKLQSLEPAGIGARSLQECILLQLQRLPNRNEHAEMLVSAH
FDAFAQKKWKALSVETGIPLDTIQDISDDIAALHPRPGLLFARPEQDVYIEPDIFITVKN
GHIAAELNTRSFPEIDLHPQYSTLLSSGSCQDTVSYLSAKYQEWRWLSRALRQRKQTITR
IINELITRQKDFFLKGRSAMKPLTLREIADCLSLHESTVSRAIKGKTIQTPYGLFEMKLF
FSAKAEASGDGDASNYAVKMHLEDLINQEDKTKPLSDQKLAELLYEQHGIQISRRTVAKY
RDQMNIPSSAARKRYK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaaacttcagcaagtacaagtattaaagcctcaactgacacaggagctcagg
caggccatcacgctgcttggctatcattcggcagagcttgccgagtacattgatgagctc
tcactggaaaaccctcttattgaacgaaaggaaacagacacaccgccactatcttaccat
aaaacaaataaaaacaggatgaatgcacaggaagcgggccttcaattaagtgatccgcaa
aaaacattgcaggatgcgttaaaacagcagtcactcgatatgaatctgtcaaacactgaa
aaaaagatttttaattatctgatttattcgcttgattcaaacggatacttggaagaagat
gtggaggaggcggcacagcgcttatctgtatcggccaacgaaacagaggctgttttggca
aaactccagtcactagagccggctggaatcggcgcgagatctttgcaggaatgcatcctt
cttcaattacagcggctgccgaacagaaatgaacacgcggaaatgcttgtttctgctcat
tttgatgcttttgcgcaaaaaaagtggaaagcgctttcagtggagactggaattccgctt
gataccattcaggatatctcagatgatatagcggctcttcatccaagaccgggtcttctg
tttgcccggccagagcaagatgtgtatatcgagcctgacatttttatcaccgtaaaaaac
gggcacatcgcagcggagctgaatacccgctcgtttcccgaaatcgatctgcatccgcag
tacagtacgcttttatcatccggctcctgtcaggatactgtctcttatttatccgcgaaa
tatcaggaatggcgctggctgagccgcgcgctgcggcagcgaaaacagaccatcacgagg
ataatcaatgagctgatcacacgccaaaaggatttctttctgaaagggcgaagcgcaatg
aaaccgctgactctcagggagatagcagactgcttaagccttcatgaatcaactgtgagc
cgggccattaaaggaaaaacgattcaaacgccttacgggctgtttgagatgaaactcttt
ttctcagcaaaagccgaggcttcaggagatggagatgcgtcgaattatgcagtcaaaatg
catcttgaagacctgatcaatcaagaggacaaaacaaaaccgctctcagatcaaaagctt
gccgaattgctatatgaacagcacggcatccaaatctcgagacgcaccgtggctaaatac
cgcgatcagatgaatataccgtcttcggcagcgagaaaacggtataaataa
DBGET
integrated database retrieval system
